Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca2g05286 | ATGGCATTACTTAATTTCCTTTTCATTCTCCTGCTTTTACCCTCCTCATTTGAGGCTTTCTCAGATGAAATTCCCTCTGATATCCAAACCCAAGACATGCATGCCTTGATTGCACAAGCCTGCATGGACATTGAGAACCAAAACACATGCCTCACAAACATTCAAAATGAGCTCACCAAAATTGGCCCACCAAGCCCCACTTCTGTCATAAGTGCTGCACTCAGGACCACACTCAATGAAGCCCAAAGTGCTATTAACAACATAACAAGATTCAGCACATTCTCTGTCAGTAACAGGGAACAAATAGCCATAGAAGATTGCAAGGAGCTTCTTGATTTCTCTGTGTCTGAGCTGGCATGGTCATTAGGGGAAATGAGGAGAATCAGAGCAGGGGACAAAAACGTGCAATATGAAGGAAACCTTGAAGCTTGGCTAAGTGCAGCTCTTAGCAACCAAGACACGTGTCTTGAAGGATTTGAAGGCACTGACAGACGCCTTGAGAGCTACATTAGTGGAAGCTTAACACAAGTCACACAGCTTATAAGCAATGTTCTGTCTCTATACTCTCAATTGCATAGCTTACCCTTCAGGCCTCCAAGGAACACCACCACCACCACTCTTTTAACAAATAATGAAGAACAACAAAGCTTGGACATAGAGTTTCCTGAATGGATGACAGAGGGTGATCAAGAGCTCCTTAAATCCAGGCCACGTGGCATTCGTGCAGATGCTGTTGTGGCATTGGATGGAAGTGGTCACTACAGAACAATCACAGATGCTGTTAATGCAGCTCCAAGTCATAGCAACAGGAGATATATTATATACGTGAAGAAAGGACTTTATAAGGAAAATGTTGATATGAAGAAGAAAATGACCAACATCATGCTCGTAGGTGATGCTGTATCTGGGAAGGGTTTCATTGCAAGGGACATGACATTTAGGAACACTGCTGGACCAGTGAATCATCAAGCTGTGGCACTGCGTGTGGATTCAGATCAATCTGCTTTCTATAGGTGCAGTGTGGAAGGGCACCAAGATACTCTTTACGCACACTCACTGAGACAATTTTACCGTGAGTGTGAAATTTATGGCACCATAGACTTTATTTTTGGCAATGGGGCTGCTGTGTTGCAAAATTGCAAGATATACACTAGAGTCCCACTTCCTTTGCAGAAGGTTACCATCACGGCCCAAGGAAGAAAAAGCCCACATCAGAGCACTGGGTTTACAATCCAGGATAGTTATGTTTTGGCTACCCAGCCCACATATTTGGGGAGGCCATGGAAGCAATACTCTAGAACAGTATACATTAACACATACATGAGTGCGATGGTTCAACCACGAGGGTGGCTTGAGTGGCTTGGAAACTTTGCTTTGGACACATTGTGGTATGGTGAGTACAGAAATTATGGGCCTGGTTCATCTCTCGCGGGTAGAGTCAAATGGCCCGGTTATCATATCATGAAAGATGCTGGTACCGCTAGTTTCTTCACGGTTCAACGGTTCATTAATGGTGACTCATGCAATCACACCGACGCCACTCTCCGGAGGGCTTGGAAAGACGACGGAAGATTCATTCCACCGCCTGAGCAAGTCCTTCTCATCATTTCATTAACCAGCAGCTCCTTCCTTTACCAAGTACGAAGGTGTGGATTAGGAGCTGCTAATAATTTCAAAATGTCTGGGGGAGATTCACGAAAGAGTAGGAGACTGGCCCTAATAGGGGTTTCAACGTTCTTACTGGTGGCTATGGTGGTTGCTGTTACCGTTAGTGTTGGGTACAGCAAAAATGGTTCCGGCGAAGATTCAAAGGATAAAAACAAATCCCACGTGGCTTCATCCATGAAAGCCGTGAAAACCATTTGTGCACCCACAGATTACAAAAAGGAATGCGAGGAAAGTCTCACGGCACAGGCTGGTAACACAACCGACCCAAGGGAACTCATCAAAATCGCCTTCAACGTAACCATCACAAGAATCAGTGAGGGACTCGAGAAAACCCAGCTAATGCACGAGGTTGAGAACGATCCTCGAACCAAAGAGGCACTCGACACGTGTAAGCAACTCATGCACCTCTCCATTGAGGAATTCAAACGGTCACTCGAGAGATTCGGTAAATTCGATCTCAACAACCTCGACAATATCCTAACGAGTTTAAAGGTATGGCTCAGCGGTGCAATCACGTACCAAGAAACGTGCCTTGACGCGTTTGAGAACACAACAACCGAAGCTGGTCACAAGATGAAGGACGTTTTGCAAACTGCCATGCACATGAGCAGTAACGGTCTTGCTATCATCACCGAGCTGTCAAAAACTCTCGATGAGATGCATCTCACAAGGCCTGGGAGACGCCTCTTGAAGGAAGCTGAGGAGTTGGAAGTGCTTGGTCACGATGACTTTGAGCTTGAACTTCCTGAATGGGTTGATGATCGCGTCGGTGTTCGTAGGCTCCTACGCATGACCGCAAGGAAACTCAGTGCTCACGTGACCGTTGCCAAGGATGGAAGTGGAAATTTCACAACCATCAACGAGGCATTGAAACACGTGCCAAAGAATAACCTAAAGCCATTCGTTATCTACCTCAAGGAAGGCGTTTACGATGAGTACGTTGAAATCTCCAGAAACATGACTCACGTGGTTTTCGTTGGTGATGGTGGTAAAAAGTCACGCATCACTGGCAACAAAAACTTCATAGATGGCGTCGGTACCTACAGAACCGCCACCGTTGCTGTTCTTGGAGATTACTTCGTTGGAATAGGCATTGGATTTGAGAATTCCGCTGGTGCAGAAAAACATCAAGCAGTCGCTTTGAGGGTGCAAGCTGACAAGTCCATTTTCTACAAATGCAGAATGGATGGCTTCCAAGACACGCTTTATGCACACACCATGCGACAGTTCTACAGGGATTGCGTTATCTCAGGAACTATTGATTTTGTCTTTGGTGATGCCGTTGCTGTTCTCCAAAACTGCACTTTCGTGGTCCGAAAGCCATTGTCAAACCAGCAATGTATTGTGACCGCACAAGGAAGGAAGGAGAGGAACCAGCCATCAGGATTAGTGATCCAAGGAGGATCCATTGTTTCAGATCCCAAATACTATCCAGTTAGGTTTGACAACAAAGCCTACTTGGCCCGTCCATGGAAGAATTTCTCGAGAACTATCTTCATGGATACTTACATTGGTGATTTGATCACACCTGATGGTTACATGCCATGGCAGACATTGGAAGGGCTTACAGGAATGGACACGTGCTTCTATGCGGAGGTGAATAACCGTGGACCTGGTTCAGATAAGTCGAAGCGCGTGAAATGGCAAGGGGTGAAGACCCTGACATCACAGGGAGCGAAGAATTTCTTGGCATCAACGTTCTTCCACGGAGATGACTGGATTAAGGTTACTAGAATTCCTTATTACCCTGGCGTGGTCTCCCCCACTCATCATTGA | 3444 | 0.4588 | MALLNFLFILLLLPSSFEAFSDEIPSDIQTQDMHALIAQACMDIENQNTCLTNIQNELTKIGPPSPTSVISAALRTTLNEAQSAINNITRFSTFSVSNREQIAIEDCKELLDFSVSELAWSLGEMRRIRAGDKNVQYEGNLEAWLSAALSNQDTCLEGFEGTDRRLESYISGSLTQVTQLISNVLSLYSQLHSLPFRPPRNTTTTTLLTNNEEQQSLDIEFPEWMTEGDQELLKSRPRGIRADAVVALDGSGHYRTITDAVNAAPSHSNRRYIIYVKKGLYKENVDMKKKMTNIMLVGDAVSGKGFIARDMTFRNTAGPVNHQAVALRVDSDQSAFYRCSVEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSYVLATQPTYLGRPWKQYSRTVYINTYMSAMVQPRGWLEWLGNFALDTLWYGEYRNYGPGSSLAGRVKWPGYHIMKDAGTASFFTVQRFINGDSCNHTDATLRRAWKDDGRFIPPPEQVLLIISLTSSSFLYQVRRCGLGAANNFKMSGGDSRKSRRLALIGVSTFLLVAMVVAVTVSVGYSKNGSGEDSKDKNKSHVASSMKAVKTICAPTDYKKECEESLTAQAGNTTDPRELIKIAFNVTITRISEGLEKTQLMHEVENDPRTKEALDTCKQLMHLSIEEFKRSLERFGKFDLNNLDNILTSLKVWLSGAITYQETCLDAFENTTTEAGHKMKDVLQTAMHMSSNGLAIITELSKTLDEMHLTRPGRRLLKEAEELEVLGHDDFELELPEWVDDRVGVRRLLRMTARKLSAHVTVAKDGSGNFTTINEALKHVPKNNLKPFVIYLKEGVYDEYVEISRNMTHVVFVGDGGKKSRITGNKNFIDGVGTYRTATVAVLGDYFVGIGIGFENSAGAEKHQAVALRVQADKSIFYKCRMDGFQDTLYAHTMRQFYRDCVISGTIDFVFGDAVAVLQNCTFVVRKPLSNQQCIVTAQGRKERNQPSGLVIQGGSIVSDPKYYPVRFDNKAYLARPWKNFSRTIFMDTYIGDLITPDGYMPWQTLEGLTGMDTCFYAEVNNRGPGSDKSKRVKWQGVKTLTSQGAKNFLASTFFHGDDWIKVTRIPYYPGVVSPTHH. | 1148 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca2g05286 | 1147 | CDD | PMEI-like_3 | 620 | 771 | - | - | |
| Seca2g05286 | 1147 | Pfam | Plant invertase/pectin methylesterase inhibitor | 36 | 187 | IPR006501 | GO:0004857 | |
| Seca2g05286 | 1147 | Pfam | Plant invertase/pectin methylesterase inhibitor | 617 | 765 | IPR006501 | GO:0004857 | |
| Seca2g05286 | 1147 | ProSitePatterns | Pectinesterase signature 2. | 972 | 981 | IPR033131 | - | |
| Seca2g05286 | 1147 | ProSiteProfiles | BRCT domain profile. | 711 | 825 | IPR001357 | - | |
| Seca2g05286 | 1147 | Pfam | Pectinesterase | 300 | 506 | IPR000070 | GO:0030599|GO:0042545 | |
| Seca2g05286 | 1147 | Pfam | Pectinesterase | 243 | 299 | IPR000070 | GO:0030599|GO:0042545 | |
| Seca2g05286 | 1147 | Pfam | Pectinesterase | 828 | 1127 | IPR000070 | GO:0030599|GO:0042545 | |
| Seca2g05286 | 1147 | PANTHER | PECTINESTERASE | 580 | 1131 | - | - | |
| Seca2g05286 | 1147 | CDD | PMEI-like_4 | 49 | 191 | - | - |
Showing 1 to 10 of 27 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca2g05286 | K01051 | - | gmx:100801686 | 965.681 |
Showing 1 to 1 of 1 entries