Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05276 ATGGAAACAGAGCAAGTTTTTCCATTCTCTGTTGTTTCTGTGGTCGAAGATGTTATTCAACAGCATGGTCGCAGGTTGAGCGATGTCAACTTGGCGTCAAGAAAAGCTGAAGAAGCTTCCTTGAGAAGGTATGAAGCTGCTGGTTGGCTGAGAAGGACGGTTGGAGTTGTTGGAGGGAAAGACTTGCCAGCTGAGCCTTCTGAAGAAGATTTTAGGATTGGATTGCGTAGTGGGATTATCCTTTGCAATGTTCTTAACAAAATTCAACCTGGATCAGTGCCCAAGGTGGTTGAAGCCCCCTGTGATTCTACTAATATTCCTGATGGGGCAGCTCTGTCTGCATATCAATACTTTGAAAATTTAAGGAATTTTCTTGTAGCTATGGAGGAAATGGGACTTCCCACCTTTGAAGCTTCTGATTTGGAACAGGGAGGAAAATCTTCAAGGATAGTGAATTGTGTTTTAGCGCTCAAGTCTTACGCTGAAGGGAAACTTGGAGGGAAAAGTGGGTCATGGAAACATGGTGGGACTGGGAATGCAAAGCCACCTACCTTTGGGAAGCCAATTTTGAGGAAAAACTCAGAACCATTCATGAAGTCTTTATGGACTATGCCATCAGGGGACAAGGATGGTTACACGAGTGATCACTCTTCATATAGTGATCCTGGACATGATCGAAATGAAGGGGGTTCCTTTCCTTCCTTGAATTCACTAGTTCGCCAATATTTATTTGACAAAAAGCCAGAGGAAATTCCCATTGTAGTGGAATCCCTGCTTAGCAAAGTCATGGAGGAGGTTGAACGTCGTATGCTAATCCAACAAGAAACATCTAAAGTAACTCAAGAAGACAAGGCATTGTCTGAAACAGAATGTTCAGTTTCAAAAGATGCTTTTATTGATGAAGAGATGGAAGAAAAGGCAGATGAACAGGACTCGAGTGTTGTTAAGATGGAAGAAAATGAAGATGGACAGGACCTAGAAGATGGACATGACCTACAAGATAAGGAAGAGGAATGTTACGATGAGAAGTATAAGGATGATGAAGAATCAAGTAGCCAAAATTTGAAGCAGCAAATGATAGTTCAACAACAGAATATAACCATCCAGGAATTGAAAAATATCATCTATCAAACAAAATCAGGAATGCAATTTCTCCAAATGGAATACCAGAAAGAGATCATCTATCTAAGTAAGCACATGCATAGCCTAGCTTCTGCTGCTTCAGGATATCATAAAGTTCTTGAAGAAAACCGCAAATTATACAATCAAGTGCAGGATCTAAAAGGAAATATAAGGGTGTACTGTCGAGTTAGACCTTTCTTGGGTGGGCAGCCAAACCATTATAGCAGTGTCGGTAATGTGGAGACGGGAAGTATATCAATCTTAACCCCTTCCAAATATGGGAAAGAGGGGAAGAAAACATTTAATTTCAATAGAGTGTTTGGTTCTTCTGCAACCCAAGAGGAAGTTTTCTCAGATACTCAACCTTTGATTCGTTCTGTTCTTGATGGTTACAATGTTTGTATATTTGCATATGGCCAGACAGGATCAGGAAAAACATATACTATGAGTGGACCAGATGACCTTAATGAGGAGACAATAGGTGTTAATTACCGTGCATTGAGAGATCTTTTCTTTCTCTCAGAGCAGAGGAAAGACGTCATTACTTATGAAATCTCTGTTCAGATGCTTGAGATTTACAATGAACAAGTCAGAGACCTACTAGCCACAGATAGTTCTAACAAAAGATATCCTTCACTAATCTATATATTGAAAATTCGCAACAGTTCTCATAATGGCATCAATGTGCCAGATGCCAACCTTGTTCCAGTTTCAACGACTTCCGATGTCATAAATTTGATGAACTTGGGGCACAAGAATCGAGCTGTTGGTGCTACTGCCATGAATGATCGTAGTAGTCGTTCTCACAGCTGCCTCACAGTTCATGTCCAAGGAAAGAACCTAACATCAGGAAGTACAATGCGTGGAAGTATGCATCTTGTTGACTTGGCAGGAAGTGAGAGAGCTGATAAAACTGAAGCCACGGGGGATAGACTCAAGGAGGCTCAACATATCAACAAGTCACTTTCCGCCTTAGGAGATGTAATCTCTTCCCTTGCCCTAAAGAATTCACATGTTCCCTACAGGAACAGTAAACTTACTCAGTTGCTTCAAGATTCTCTTGGAGGGCAGGCAAAGACCCTCATGTTTGTTCATATTAGTCCAGAGCCTGATGCTCTTGGAGAAACACTTAGCACACTGAAGTTTGCTGAACGAGTCTCCTCTGTTGAACTTGGTGCTGCCCGGGTTAATAAAGACAATGGAGATGTGAAAGAGCTTAAAGAACAGATTGCTAGTCTGAAGGCAGCATTAGCAAGAAAGGATGGAGGAGAAGGAGAACACTTTCAACAATCTGTCAATAGTGGCCATGAGGTACCAAAGTTGAAATCCTATGCCTCTTCTCCTCCCATACAACGTAGTTGGACATCTGGAGGTCGTAACAAGCTACCAAAAGATGATTCTAGTAGCATAGAGGACCAGAAAAAAGGTGCATCAAAGCTGAAAAGACGAAGCCTAGATCTCCATGACATGTATAAAAGGCCTGCATGGCCACATGTTAACAACCATGGGGTAAATGGAAAAGATGATGATAAGGAATCAATTTCCGGAGATTCGGTTGATAAGGTTATGATGAACAGGAATGATAGCTTAACTAGTGATGATAGCCTTGTGGGACAATGGGAAGCAGAATGTAAACAATTTTCTCCATTGTTAAGTCCCAGTTCTCTTTCAGAGCCTTCAAAAATATGTCTGGAACAATCCTCACATGGCTATGAGATGGCCACCACATATGAATCTGATGAGCTTGACATTGCAACTAGTGATTCTTCAGAATCAGACTTGAATTGGCTATCACCTGCACCCAAACCAACCACCCTTTCAAATGGATTAGGCTCTAAACAAAAAAAATCAACAAATTCCAGACCAACTAAGAACCCAGAAACCAGGAGCATGATCCCATCATTAATTCCTACTCCATCAAGGAAGCAACCTACCCTAGGTAGTTCAGCCAGAAAGCAACCAGGATCTATTGATGTTAAGAGAAGATCTGGGAGTGCAAAGTGA 3126 0.4139 METEQVFPFSVVSVVEDVIQQHGRRLSDVNLASRKAEEASLRRYEAAGWLRRTVGVVGGKDLPAEPSEEDFRIGLRSGIILCNVLNKIQPGSVPKVVEAPCDSTNIPDGAALSAYQYFENLRNFLVAMEEMGLPTFEASDLEQGGKSSRIVNCVLALKSYAEGKLGGKSGSWKHGGTGNAKPPTFGKPILRKNSEPFMKSLWTMPSGDKDGYTSDHSSYSDPGHDRNEGGSFPSLNSLVRQYLFDKKPEEIPIVVESLLSKVMEEVERRMLIQQETSKVTQEDKALSETECSVSKDAFIDEEMEEKADEQDSSVVKMEENEDGQDLEDGHDLQDKEEECYDEKYKDDEESSSQNLKQQMIVQQQNITIQELKNIIYQTKSGMQFLQMEYQKEIIYLSKHMHSLASAASGYHKVLEENRKLYNQVQDLKGNIRVYCRVRPFLGGQPNHYSSVGNVETGSISILTPSKYGKEGKKTFNFNRVFGSSATQEEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDDLNEETIGVNYRALRDLFFLSEQRKDVITYEISVQMLEIYNEQVRDLLATDSSNKRYPSLIYILKIRNSSHNGINVPDANLVPVSTTSDVINLMNLGHKNRAVGATAMNDRSSRSHSCLTVHVQGKNLTSGSTMRGSMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVISSLALKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPDALGETLSTLKFAERVSSVELGAARVNKDNGDVKELKEQIASLKAALARKDGGEGEHFQQSVNSGHEVPKLKSYASSPPIQRSWTSGGRNKLPKDDSSSIEDQKKGASKLKRRSLDLHDMYKRPAWPHVNNHGVNGKDDDKESISGDSVDKVMMNRNDSLTSDDSLVGQWEAECKQFSPLLSPSSLSEPSKICLEQSSHGYEMATTYESDELDIATSDSSESDLNWLSPAPKPTTLSNGLGSKQKKSTNSRPTKNPETRSMIPSLIPTPSRKQPTLGSSARKQPGSIDVKRRSGSAK. 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05276 1041 FunFam Kinesin-like protein KIN-14I isoform A 425 805 - -
Seca2g05276 1041 MobiDBLite consensus disorder prediction 168 232 - -
Seca2g05276 1041 MobiDBLite consensus disorder prediction 838 869 - -
Seca2g05276 1041 CDD KISc_C_terminal 428 765 - -
Seca2g05276 1041 Coils Coil 410 430 - -
Seca2g05276 1041 ProSiteProfiles Kinesin motor domain profile. 430 763 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05276 1041 MobiDBLite consensus disorder prediction 321 335 - -
Seca2g05276 1041 MobiDBLite consensus disorder prediction 795 890 - -
Seca2g05276 1041 MobiDBLite consensus disorder prediction 959 1041 - -
Seca2g05276 1041 Pfam Calponin homology (CH) domain 43 161 IPR001715 GO:0005515
Seca2g05276 1041 MobiDBLite consensus disorder prediction 303 355 - -
Seca2g05276 1041 ProSitePatterns Kinesin motor domain signature. 663 674 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca2g05276 1041 SMART kinesin_4 428 771 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05276 1041 Gene3D Kinesin motor domain 425 803 IPR036961 -
Seca2g05276 1041 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Seca2g05276 1041 Gene3D - 33 164 IPR036872 -
Seca2g05276 1041 Pfam Kinesin motor domain 436 763 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05276 1041 PRINTS Kinesin heavy chain signature 633 650 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05276 1041 PRINTS Kinesin heavy chain signature 713 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05276 1041 PRINTS Kinesin heavy chain signature 664 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05276 1041 PRINTS Kinesin heavy chain signature 504 525 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05276 1041 MobiDBLite consensus disorder prediction 959 1026 - -
Seca2g05276 1041 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 430 795 IPR027417 -
Seca2g05276 1041 MobiDBLite consensus disorder prediction 336 352 - -
Seca2g05276 1041 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Seca2g05276 1041 CDD CH_AtKIN14-like 42 159 - -
Seca2g05276 1041 SMART ch_5 42 160 IPR001715 GO:0005515
Seca2g05276 1041 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 1006 IPR027640 GO:0003777|GO:0007018
Seca2g05276 1041 MobiDBLite consensus disorder prediction 820 837 - -
Seca2g05276 1041 Coils Coil 770 790 - -
Seca2g05276 1041 SUPERFAMILY Calponin-homology domain, CH-domain 42 169 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05276 Seca-Chr2 139277181 139283552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05276 418 763 Calmodulin-binding Proteins AT5G65930 41.329 7.14e-76 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05276 K10406 - gmx:100799535 1537.32