Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05270 ATGGCATTAACCCCATTTTTTAATGAAGCTGGAAGGAGGGTTGCTAGTTTTATTGGAGACAAATCTGATGCTGAGAATAAACCGAAAGCTTCTGGGATGGTTGACTTCAATGCTAGTGAACCTGTTGTTATCCTTGGATTTGGACAAATGGCCCAGGTTCTGGCCAATTTCCTGTCCAACACATTGGCTTCAAGAGGAGATAGTGATGCAACAGGATGGCCTTATGTGGCATTTGATCCTGACCCCAAGGTAGTAAAGGCAGCTAGAAAACTTATTTTTCCAATTCTCTATGGGGATGGATCACGTCCTACCGTCCTTCAATCTGCTGGTATCCAATCTTCAAAAGCTATCATGGTTATGTACACTTGGAAGAAGAAGATAATTGAAACTGTTCAGAGTTTACGATTGGTTTTTTCAGCTGGTTTTGACCATGGCTTGGAAGTTCATGCAGAGGCTATCAAACAAGGTTTTGATTCAAGTATCTATGTCAGGAGTTCTCTGATCAATATGTATGGGAACTGTGAAATGTTGGATGTTGCAAAACAACTTCTTTCTTGA 558 0.4086 MALTPFFNEAGRRVASFIGDKSDAENKPKASGMVDFNASEPVVILGFGQMAQVLANFLSNTLASRGDSDATGWPYVAFDPDPKVVKAARKLIFPILYGDGSRPTVLQSAGIQSSKAIMVMYTWKKKIIETVQSLRLVFSAGFDHGLEVHAEAIKQGFDSSIYVRSSLINMYGNCEMLDVAKQLLS. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05270 185 ProSiteProfiles RCK N-terminal domain profile. 41 135 IPR003148 GO:0006813
Seca2g05270 185 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 1 139 - -
Seca2g05270 185 Gene3D - 41 163 - -
Seca2g05270 185 Pfam TrkA-N domain 42 138 IPR003148 GO:0006813
Seca2g05270 185 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 42 136 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05270 Seca-Chr2 139243471 139244910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05270 1 172 Inorganic Solute Cotransporters AT4G04850 49.457 2.86e-49 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05270 K03455 - gmx:100798214 206.838