Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05266 ATGGAATCAAGAACACAATCTCAGCAGCAGCAGGCCAGGGGTGATCGCCTAATTCTAAATCCGCAATCAAAGCGGAGACGTCAAGATTCTCAACACTCCAACAACTGCTGTATCATTGGAAATTCGAGGTCTCTATATCACATAACCACTCATGACATCGTCAATTGCGTGACAGATTTAATTCAAAGATTGGTACCGGAGGAGTTTGAGCGCCAACTAAATCAAAGATCAATTATTAATGATGAGACTACTGGAGCTGAAGCCAAGTACTTTAAGTTGGTTTTTAAGAATGAATTGCCTGCTACAATTTTCACTAACTCCAAGATCAAAGCTAAAGACGACACCCTTGTTGAGATTGCTCTCTATGATATTAGATCTCAGTCTATAGTTACTGATGGTCCACTGTCTTCCATGAAGGCAGAGCTTTGTGTCCTTAATGGTGACTTTGACAGGGAAGTCTGGACTTCAGACCAATTCAAGAGCCAAATCATACGTCAAAGAGACAATAAAGGCAAGTTATTGGCAGGAGATACGGTTATTACACTCAAAAATGGAGTTGGTTACATCAATAACAAGAATATTATGTTCACTGATAACTCTTGCTGGACAAGAAGCCAACGTTTTAGGCTAGGAGTGCAATCCGCCAATTTCAATGAGACAAGCATGATCATGGAAGGTACAAGTAAACCTTTCAGGGTCAAGGATAGCAGAGGAGAGTTGAATCAGAAACACTACCCTCCATCCCCCAATGATGAACTGTGGCGTCTGACAAAGATATCAAAAAATGGGAAAATCCATAAGCTGCTGTCTTCGCAAGGAATAAACACTGTCAATGACTTGTTGCAGCTACATGAAACCGATCCATCTTCTTTGCAGGAGAAATTTGGTCAAATTTCAAGGAATCTACGGGAAAAAATTATTAAGCATGCTAAGACTTGTGTTGCTGAGGTGACATTGAATGGACAAAATAATCATTCACCCAATGCTCTCAACTCCGACCACAAGGGGTTGGTGGACAGTACTGTCCAAGATTCGATTCCAGTTGACTTGCAATCGCTTGATTTGCGAACTGCACGGCAAGATCAACTAGAACCAAGGCAAGATTTTAGTGAACCGTCTACCTCAAAATTGCACATTGGGGAAGCAGATAACCAAGCTATCGGTTTAGAAGAGCTCTTATATATTCCATCACCGATCATGTTTGATGTTTATTCAACACACAATGATTTTTCGGAGATTCAAGTTGCAAATGCTACTTCCTTTGGATTTGGAAGAGCAAGCAGAGTTTAG 1290 0.4085 MESRTQSQQQQARGDRLILNPQSKRRRQDSQHSNNCCIIGNSRSLYHITTHDIVNCVTDLIQRLVPEEFERQLNQRSIINDETTGAEAKYFKLVFKNELPATIFTNSKIKAKDDTLVEIALYDIRSQSIVTDGPLSSMKAELCVLNGDFDREVWTSDQFKSQIIRQRDNKGKLLAGDTVITLKNGVGYINNKNIMFTDNSCWTRSQRFRLGVQSANFNETSMIMEGTSKPFRVKDSRGELNQKHYPPSPNDELWRLTKISKNGKIHKLLSSQGINTVNDLLQLHETDPSSLQEKFGQISRNLREKIIKHAKTCVAEVTLNGQNNHSPNALNSDHKGLVDSTVQDSIPVDLQSLDLRTARQDQLEPRQDFSEPSTSKLHIGEADNQAIGLEELLYIPSPIMFDVYSTHNDFSEIQVANATSFGFGRASRV. 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05266 429 Pfam Calmodulin binding protein central domain 249 313 IPR046830 -
Seca2g05266 429 MobiDBLite consensus disorder prediction 1 17 - -
Seca2g05266 429 MobiDBLite consensus disorder prediction 1 33 - -
Seca2g05266 429 Pfam Calmodulin binding protein-like N-terminal domain 91 235 IPR046831 -
Seca2g05266 429 PANTHER OS02G0177800 PROTEIN 36 319 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05266 Seca-Chr2 139206394 139213372 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05266 53 314 Calmodulin-binding Proteins AT5G57580 36.594 3.56e-55 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05266 - - gmx:100798493 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05266 2 139206394 139213372 Seca2g05266 2 139206394 139213372 ECH