Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05265 ATGATGAAAGGGATCTTCAAGTTCCTGGTGGTAAGCGGAGACATGGCTACTCACAACAAGAAGAGGCTCGTGTGGTTAATGTGCAGTAAATTCGCCTTGTGCTTGGAACCCCTGCTTCGAAGAGTGATGCAAGAGATGATTCCACCTATGCTCCAGAGTCACCTATGTCCGCGTTGTGCATTAACCGTCAACCAGGAGGCTAGCACATCTGGAAGGAGTTCTTTGCAATTGCAGCTGTGCTTCACGAATAGATTGCCTCACACAATTTTCACACAGTCCAATATCACAGCTGAGGGAGGTGTTGCACTTCAAATTGAGCTGCGTGATCAGCAAGGCAAAATCAGGGACGAAGGTTCCTCTATGAAGGTCCAGATCTGTGTCCTTAATGGTGACTTTGAAGATGAGGTTTGGAGTGCAGAGGAATTTAATGACCAAATTGTAACTCAAAGACCGGAAAAAGGACCATTGCTGAATGGAGATACGGTTATTACGCTGAAAAATGGAGTTGCTCACATCACTAACAAAATTGTATTCACTGATAACTCTAGCTGGACAAGAACCAAAACGTTCCGCTTAGGAGTTAAAGTGCTGCAATCTAATTCCAGTGGAGCAAACATTAGGGAAGGCAGAAGTGAACCTGTTAAGGTCTTGGATTACAGAGGACACGCGTGGAAGAAACACGACCGTCCATCATTGAATGATAAGGTATGGCGTCTGAAGAGGATAGCAAAAGATGGCAAACTTCACAGGCAGCTGTCCTTTCATAAAATAAAAACTGTTAAGGATCTTCTACAGTTGTACGTAACTAATCAATCTTCATTACAACAGAAAATAGGCGGAGTTGCTGGGAAGGCATGGGATGCAATTATTGCACATGCTAAAGGTTGTGATGTAGACGATGATAAGCGCTACATCTATTTCGCAGCAGAATCATTAGTATCTCTTGTCTTTAATTGCATCTATGAGGTTGTGGAGGTGATTTTTAATGGGCAAAATTCTCGTCCTATTCAATCTCTGAATTCGGAAGAGAAGCGTTTGGTGGAAAGAGTTAAGCAGCAAGCTTACAACAATTTGAAGGATCTAGTGCCACTTGAATCAACACTGGCACTGCCAGGTGTGCAAACTACACAATATGGTGGTCCAGATCAAAGTCTGCAACAGTTTGAATTTCCAAATGCTCAGCAAGGCCAACCACCAGAAACGTGGCCAACCACTTCAACTTCGGTAGGTTCTGATATATTGTCAGTGTTGTCGGGACAATTCACCCCAGGAGCATATATTGATGATGGAAACAGATTGCCCGCTAGTGTATCACAGACTGGTCCATTTGCAAATTGTTTTCCTCCTAATAACCAATGGGAGCAAGTAGATCCTTTCTACTTTACTTATGGTGATGGAGCAGAATGTAGCAATCATTACTCCTTCCCCAACTCTGCTGTGTATATATCAACCAAAGGGAAAGGCAAGACAGTTTGGCGTAAGATTCGAGCTGCTCTCAAATGGGTCAAACTGCATGTAGCTAAAAGGAACGCAAAACTTTTTCACCATCCGTATTGA 1557 0.4322 MMKGIFKFLVVSGDMATHNKKRLVWLMCSKFALCLEPLLRRVMQEMIPPMLQSHLCPRCALTVNQEASTSGRSSLQLQLCFTNRLPHTIFTQSNITAEGGVALQIELRDQQGKIRDEGSSMKVQICVLNGDFEDEVWSAEEFNDQIVTQRPEKGPLLNGDTVITLKNGVAHITNKIVFTDNSSWTRTKTFRLGVKVLQSNSSGANIREGRSEPVKVLDYRGHAWKKHDRPSLNDKVWRLKRIAKDGKLHRQLSFHKIKTVKDLLQLYVTNQSSLQQKIGGVAGKAWDAIIAHAKGCDVDDDKRYIYFAAESLVSLVFNCIYEVVEVIFNGQNSRPIQSLNSEEKRLVERVKQQAYNNLKDLVPLESTLALPGVQTTQYGGPDQSLQQFEFPNAQQGQPPETWPTTSTSVGSDILSVLSGQFTPGAYIDDGNRLPASVSQTGPFANCFPPNNQWEQVDPFYFTYGDGAECSNHYSFPNSAVYISTKGKGKTVWRKIRAALKWVKLHVAKRNAKLFHHPY. 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05265 518 Pfam Calmodulin binding protein central domain 231 296 IPR046830 -
Seca2g05265 518 Pfam Calmodulin binding protein C-terminal domain 302 363 IPR046829 -
Seca2g05265 518 Pfam Calmodulin binding protein-like N-terminal domain 77 218 IPR046831 -
Seca2g05265 518 PANTHER OS02G0177800 PROTEIN 27 397 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05265 Seca-Chr2 139198461 139202751 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05265 29 386 Calmodulin-binding Proteins AT5G26920 40.608 2.40e-77 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05265 - - lja:Lj1g3v4083120.1 534.643