Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05262 ATGGAGATGGAGAAAAGGCGTTCCAAGGGAAGCTTCCTCAGCTTGTTTGATTGGAATGCCAAATCTCGAAAAAAGCTGCTTTGGAACAATGCTACCTTGCCTGAGGTTTCAAAGCAAGGAAAGGAAAATGTGGAGACTTTGTCAGAGTCACAGCTCAGTAGGATGAAGGTGGATGAAAATGGAGCAAGTCCAAATAATATTGCAAGTTGTGATTTTAACTGTTCCCTATCAATTTATAGTGATGAAGGATGTGGGAGTAAAGCCCCTGGGTTAGTAGCTAGGCTAATGGGTTTGGATTCGATGCCAGCTTCGGCAGACACTGAGCTCGCCTGCACTTCATTGTATAGCTCCAACTCTCATGGAGCTTCTCATTGTAATGAGGGTCCTCTTCATTCAATGGATGACTTTCACCCTGTGGACTACGTAAACACACCACTTAAGCTGCAGAAGTTGTCTCGGGATGCCATGGAATCAAGGGCACAGAAAATGGAAAACCGGCCAATAAAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCAGCTAAACCCATTCCAGTTACTCACAATAGAATGTTGTCTCCTATCAAGAGTCCTGGTTTTCTGCCACCAAAGAATGCGGCTCACTTAATGGAGGCAGCTGCTAAGATAAGTGAGTCAAACCCTCGGCCATATACGAGGGATAGAATGCCATCAGTTAGGCCTTCATCTGTTCCCTTGAGAATTCTTGATTTAAAAGAGAGATTGGAAGCTGCACATTATGCATCCATGCCTAAAAAGCTTGTGGATCCAAGCAATACCAACTCTGCAAATGGAAATCTTAATGAGAGGAGTAGCAGTTTGTATAAATGCACTTCAGCGTTCAAGGGTTCAAGAGATTCAGACAAAAATAGATCTTTCCATTTAGCAAGTAAAGGAAAATCAGTTTCACTTGCAGTCCAAGCCAAAACCAATGTTCAAAACAGAGATACATTGGTTTCAAATGGTAATAGGAAATATATGAAGCAGAAAGAACAGAATGAGATAAAGTCAAACCAGCTCCCAAGGAACCAGAAACCAAGGTCAAACCGATCCATGCAGCAGAGAACTTGCACAAGTCGGAATGGTAGTGTGCTTAGGCAGAATACTCAAAAGCAAAATAGCATGGCCAGCAAAGGCAAATCAACTTTGAAAGTAGATTCCAATAAGCCAATGACACAAGCTTTGTCTTCAGAAAGTTCTACTGGAATAAGGAAGACAAGAAACAAGGTTGCTATAAATGCTAATATTCAACCTAAAAGGTCAAGCTCTAGGGCAACTGATAACCAAAAGGAGTTTCTGCCATCCAAAACAGAGAGTGTTTCCCAAAAGAAAAAGTATGTAAGAAGAGATGTCCATGAGGCAAGAGGGCCTGATAATGCAGTGAATAATTTTCAAAGTAAGTCCATAAAATGCAATTTTACAACTGATGGAAGTATTGATCAGGATGCATTTAACATGAAAGAAAGCAAGGATGTTATTTCATTTACATTTACATCTCCCTTGAGGAGAAGCATGCCTGAGTCACCCATCTCTACTGAGCAAGCTATGGGAACCAGAAACATAATTGGAGTCAACTCTCTCGGGAATAGTGATAATCTTTACCCCATAAATTTATCATCATCTCCGCCAGGGTTAAATATGATAGATGGTGATGCTTTAAATGTCCTGTTGGAGAAAAAGCTGCAAGAATTGGCATCTAGACTCAACTTGCCTCAAGGTATCCTGGCTACAGAGGGGTCTTCTACTGGTTTGAGATCTAGTTTGCAAGACAAAGTTCCCAGCATGGTTAGCACCACATCTAAGGAACAAGACAAAAACTTTCACCCTGACCTGTTTGGTGACAAAGTAGATAGCATGCATAACTATCGGTGTTCTAGTGAAGATCCAGTGTTTAACATGAATCGACAACTTCGGACATCAGAAGTAAGGGAAGATCCTAGCTGTAGCAGTAACAGTGAAAGAGGAAATGATCTAGAATGTCAGCATTCCGGTGCAGTTACAGTTTTTGAAACTCCCTCTGTTAGTGAAAGTTACTTGGATAGTGAAGACAGTAGTACATATGGCAGCACAGTTTATTCTTCTATGCAAGATGAAGAAGTATCTAATTTTTCCCAGATAAATGAATCTGTATCACTTGAAAATGAGGTGAAATGGTTGGAGCAAAGCCCTTCCACATCAGTGGGTGGAAATATGATTGTCAAACAAATAAGTGGAATATCAAGTTTGGTAGATTTTAAAATATCATGTACCACGGAACTTGAATATGTACAGGATATACTTGGCAATGCAGAGTTTATGGCAGAAGAATTTGTCATGGGCCAAACTGATACGGTCATGATGCCAAATCTCTTTGATCTGTTGGAGAATCAGGGTAATGGAACAGAAAACTATGAGGAAGAGTGCTCTAAGCTGGAAAGGAAGGTTTTATTTGACTGTGTGAGTGAGTGCCTAGAGTTGAGATGTAGGCAAGCTTTTGTTGGAAGTTGCAAAGCATGGCCTAGATGGGTAACATCAGTTCAGAGGAAGAGCTGCTTGGCAGAAGAATTGTACAAGGAGATTCTGGGTTTTAGAAGCATGGAAGAGGTAATGATGGATGAGCTTGTCAGCAAGGACATGAGCACTGGATGCGGGAAATGGCTTGACTTTGATGTTGAAGCATTTGAAGAGGGTTTAGAGGTTGAGCGACACATACTAGCTTATTTGATTAATGAATTGGTTTCTGATTTATTGCTTGTCTAA 2757 0.4081 MEMEKRRSKGSFLSLFDWNAKSRKKLLWNNATLPEVSKQGKENVETLSESQLSRMKVDENGASPNNIASCDFNCSLSIYSDEGCGSKAPGLVARLMGLDSMPASADTELACTSLYSSNSHGASHCNEGPLHSMDDFHPVDYVNTPLKLQKLSRDAMESRAQKMENRPIKRFQTEMLPPKSAKPIPVTHNRMLSPIKSPGFLPPKNAAHLMEAAAKISESNPRPYTRDRMPSVRPSSVPLRILDLKERLEAAHYASMPKKLVDPSNTNSANGNLNERSSSLYKCTSAFKGSRDSDKNRSFHLASKGKSVSLAVQAKTNVQNRDTLVSNGNRKYMKQKEQNEIKSNQLPRNQKPRSNRSMQQRTCTSRNGSVLRQNTQKQNSMASKGKSTLKVDSNKPMTQALSSESSTGIRKTRNKVAINANIQPKRSSSRATDNQKEFLPSKTESVSQKKKYVRRDVHEARGPDNAVNNFQSKSIKCNFTTDGSIDQDAFNMKESKDVISFTFTSPLRRSMPESPISTEQAMGTRNIIGVNSLGNSDNLYPINLSSSPPGLNMIDGDALNVLLEKKLQELASRLNLPQGILATEGSSTGLRSSLQDKVPSMVSTTSKEQDKNFHPDLFGDKVDSMHNYRCSSEDPVFNMNRQLRTSEVREDPSCSSNSERGNDLECQHSGAVTVFETPSVSESYLDSEDSSTYGSTVYSSMQDEEVSNFSQINESVSLENEVKWLEQSPSTSVGGNMIVKQISGISSLVDFKISCTTELEYVQDILGNAEFMAEEFVMGQTDTVMMPNLFDLLENQGNGTENYEEECSKLERKVLFDCVSECLELRCRQAFVGSCKAWPRWVTSVQRKSCLAEELYKEILGFRSMEEVMMDELVSKDMSTGCGKWLDFDVEAFEEGLEVERHILAYLINELVSDLLLV. 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05262 918 MobiDBLite consensus disorder prediction 319 451 - -
Seca2g05262 918 Coils Coil 793 813 - -
Seca2g05262 918 Pfam Domain of unknown function (DUF4378) 758 910 IPR025486 -
Seca2g05262 918 Coils Coil 146 166 - -
Seca2g05262 918 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 914 - -
Seca2g05262 918 Pfam DUF761-associated sequence motif 80 104 IPR032795 -
Seca2g05262 918 MobiDBLite consensus disorder prediction 339 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05262 Seca-Chr2 139176625 139181458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05262 3 916 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.039 3.45e-105 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05262 - - gmx:102663635 1310.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05262 2 139176625 139181458 Seca2g05262 2 139176625 139181458 ECH