Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05257 ATGTCTAACACCAGCAACAATACCGTTGGGGTTGACAACACATTCAGAAGAAAATTTGATCGAGAAGAGTATCTCGAACGAGCTCGGGAGCGTGAGAGGCAGGAGGAGGAGAATCGATCAAAACCTAAAGCTAAAGGTCCTCCCGTACAGAGGAAGCCCTTGAAACATCGAGATTATGAAGTAGACCTCGAATCCCGCTTGGGCAAGACTCAGGTTGTTACACCAGTTGCACCACTAAGCCAGCAGGTACCTGTTTTCCATATTTGTTTCAGATTTCTAGTTATCATTAATTAG 294 0.449 MSNTSNNTVGVDNTFRRKFDREEYLERARERERQEEENRSKPKAKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQVPVFHICFRFLVIIN. 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05257 97 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 2 82 IPR040107 GO:0000398|GO:0005681
Seca2g05257 97 MobiDBLite consensus disorder prediction 22 56 - -
Seca2g05257 97 MobiDBLite consensus disorder prediction 22 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05257 Seca-Chr2 139160516 139161471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05257 4 89 C2H2 Transcription Factor Family AT3G05760 73.563 3.31e-40 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05257 K12848 - gmx:100527057 137.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05257 2 139160516 139161471 Seca2g05257 2 139160516 139161471 ECH