Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca2g05242 | ATGTCAAGACGGTACAAGAGTACCGGAGTTGAAGCCGAACAAGGTCGTAAGAGGAGAGAGGATAACCTCATTCAGATCAGGAAGAACAAACGCCAACACACTCTCCTCAACAAGCGAAACCACCCTCTGCCTCTTCTTCACCATCATCATATTCATGATCATGCCTTTCCCCTCTCCAACACGTTGGAAGGTCATAATAATAATCATAATATTCCTGCCTTGCTGCAACGAATATGGTCCAACGACCCTGCTGCACAACTGGAGGCAACTGCTCAATTCAGAAAGCTACTATTATTAACCTTATCAGTAGACAGCCCTCAAATTGATGAGGTCATCGAGGAACGTCTTGTCTCTAGGTTTGTCGAGTTTTTGAGATACCATGATTTACCCAATTTGCAGAATGAGGCTGCATGGGCTCTGAGCAATATTACTTGGGGAAAATCTGAGCACACAAGACTTGTAATTAAACAAGGTGCTGTTCCCGTGCTTGTCAACCTTCTGCACTCCAGTACCATTGATGTCAAAGAAAAGGCACTATGTTGTTTAGGTAATATTGCACTAACCAGTAGGGATATGGTTCTTGATCATGGTGCACTCTTGCCAATACTCTCCCTGTTGAAGCACTTTACAACATTACCTCTGTATTTGTTAAGGACTGCTACATGGGCTTTATCTAATCTCTGTAGTGGAAACCCTCCTCCACCTTTTCAACAGGTAAAGCCTGCCTTGCCTGTCCTTGGGCAACTCATCCACTTGAATGATGAAGGAATCATGAGCAATGCTTGCTGGGCTCTCTCTTACCTTTCAGATAGCACAATTGAAAAAATCCAAGCTCTCATTGAAGAAGGACTTTGCCCTCAACTTATCCACCTTCTCAACTCGCATCCATCACCTCTAGTTATTGAGCCTGCTCTTCGGACACTTGGAAATATTGTTTCTGGTAATGATGTTCAGACTCAGCTTGTAATTGACAATCTAATACTTCCTTCTCTTCAACGATTTCTGACACAAGATCACAAAAAAAGCATCAAGAGAGAAGCTTGTTGGATAATTTCAAATATAACAGCTGGGAATGAAGATCAAATACAGGCTGTCCTTGACGCCAATATTATTCCTGCTCTTGTTGATCTTATTCACTATGGGGAGTTTGACATTAAGATGGAGGCTGCCTGGGCCATCAACAATGCCATTTTTGGAGGATCTCATTGGCAGATAAGGTTCCTTACGAGTCAAGGTTGCATTGAGGCACTATGTGTTCTCTTGACCTGTCCAGACCCAAATGTTGTGAACGTTTGTCTAGAGGGTCTGGAGCGCATTTTAAAGGTGGGAAAAGTTGATAAGGAACTGGGACTACATGGTGGAGTTAATGTTTATGCTCAAATGGTTGAAGATTGTAAAGGATTGGAAAATATTGAAAATCTGGAGACCCATAGCAACATTGAGATTTATGGTCTGGCTGTGAAGATTTTGGGGACATATTTTGTTGATGACTTGCAAGAAGATCCACCGGATGGGTATGCTTGTGAGTTAAATTTTGGAGGGGAAGTGAGGGAAGGGAAGGGTTTACTGGAAGCCCTTCCCTCTTTTGTGTTTGTGGAATACTATGATATTCCTGATATGGTAGAAGGAGTGTGGTCTGATGACCATATTGTACGAATGGGCGCAACTGCTAAATTTAGAGAGTTCTTAGCATCACGTTACCCTCCTCCGGTTGACGTGGTGATCATCAGGGCAGTTATCCCTAGGTTTGTGCAGTTTTTGAAAAGGAATTATCCACCCCGATTGAAGGTTAACGCTGCATGGTGTCTGAGCAATATTGCTTGTGGAAATTCTGAGCTTATAATTAAACACGATAATGCTGTTCCACGGCTTGTGCGGCTTCTGAGCTCTAGGAACGCTGATATCAGAGAAAACGTAGTAAGGGCCTTAGGTAATATTGCTGGCGATGGCCCAAACAGTAGGGATGTTGTTCTGAATCATGGTGCTCTCTCGCCAACATTGTCTATGTTGGATCCAATTTCAAGATTTTCTAGTTCTAAGTTAAGGAGGACTACTATATGGGCTTTATGTAATTTCTGCCGTGGAAATCCTCCTCCACCTTTTCAACAGGTAAAACCTGCGTTGCCCGTCCTTCGACTACTAATTAACTACTTGAGTGATGAAGAAGTAGTGAAGGTTGCATGCTGGACTCTCTCTTACATTACAGCTGATGCCGACACAAATGAAAAAATCCAAGTTGTCATTCAAACAGGCGTTTGTCCACGCCTTATCCAACTTCTGCACTCGGATCCATCAGCTCCAGTTATTGAGCCTGCTCTTCGGACACTTGGAAGTGTTGTTTCCGGTGATGATAATCAGACTCAGTTTATAATTGACAGCCAAGTGCTTCCTTGTCTTCATCAACTTCTGACACAAAATTACAAAGAAAGAATCAAGGCAATAGCTTGTTGGACAATTTCAAATATCACAAGTGGCAAAGTAAGTCAAATACAGGCTGTCATTGAGGCCAATATTATTCCTCCTCTTCTTGATCTTATGCGGAATGCGGAGTTTAACATCAAGAAGGAGGCTGCTTGGGCCATCTGCAATGCCATTTATAGAGGATCTGTTGACCAGATAAAGTATGTTTTATCATGA | 2637 | 0.4259 | MSRRYKSTGVEAEQGRKRREDNLIQIRKNKRQHTLLNKRNHPLPLLHHHHIHDHAFPLSNTLEGHNNNHNIPALLQRIWSNDPAAQLEATAQFRKLLLLTLSVDSPQIDEVIEERLVSRFVEFLRYHDLPNLQNEAAWALSNITWGKSEHTRLVIKQGAVPVLVNLLHSSTIDVKEKALCCLGNIALTSRDMVLDHGALLPILSLLKHFTTLPLYLLRTATWALSNLCSGNPPPPFQQVKPALPVLGQLIHLNDEGIMSNACWALSYLSDSTIEKIQALIEEGLCPQLIHLLNSHPSPLVIEPALRTLGNIVSGNDVQTQLVIDNLILPSLQRFLTQDHKKSIKREACWIISNITAGNEDQIQAVLDANIIPALVDLIHYGEFDIKMEAAWAINNAIFGGSHWQIRFLTSQGCIEALCVLLTCPDPNVVNVCLEGLERILKVGKVDKELGLHGGVNVYAQMVEDCKGLENIENLETHSNIEIYGLAVKILGTYFVDDLQEDPPDGYACELNFGGEVREGKGLLEALPSFVFVEYYDIPDMVEGVWSDDHIVRMGATAKFREFLASRYPPPVDVVIIRAVIPRFVQFLKRNYPPRLKVNAAWCLSNIACGNSELIIKHDNAVPRLVRLLSSRNADIRENVVRALGNIAGDGPNSRDVVLNHGALSPTLSMLDPISRFSSSKLRRTTIWALCNFCRGNPPPPFQQVKPALPVLRLLINYLSDEEVVKVACWTLSYITADADTNEKIQVVIQTGVCPRLIQLLHSDPSAPVIEPALRTLGSVVSGDDNQTQFIIDSQVLPCLHQLLTQNYKERIKAIACWTISNITSGKVSQIQAVIEANIIPPLLDLMRNAEFNIKKEAAWAICNAIYRGSVDQIKYVLS. | 879 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca2g05242 | 878 | Gene3D | - | 2 | 41 | IPR036975 | GO:0006606 | |
| Seca2g05242 | 878 | FunFam | Importin subunit alpha | 66 | 495 | - | - | |
| Seca2g05242 | 878 | SUPERFAMILY | ARM repeat | 522 | 878 | IPR016024 | - | |
| Seca2g05242 | 878 | Pfam | Importin beta binding domain | 3 | 90 | IPR002652 | GO:0006606|GO:0061608 | |
| Seca2g05242 | 878 | FunFam | Importin subunit alpha | 533 | 878 | - | - | |
| Seca2g05242 | 878 | SUPERFAMILY | ARM repeat | 2 | 497 | IPR016024 | - | |
| Seca2g05242 | 878 | PANTHER | IMPORTIN ALPHA | 5 | 497 | - | - | |
| Seca2g05242 | 878 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Seca2g05242 | 878 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 619 | 661 | IPR000225 | GO:0005515 | |
| Seca2g05242 | 878 | SMART | arm_5 | 650 | 694 | IPR000225 | GO:0005515 |
Showing 1 to 10 of 39 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca2g05242 | K15042 | - | aew:130779640 | 568.926 |
Showing 1 to 1 of 1 entries