Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05218 ATGGATTGTCTGGGTATTCGAAGAAGCAATTATAATGGAAGGCATGATGATTCAAAAGAGAAGGAGGAGTTTATTTTAAACATAGTGATCATGGTTGTCTCCATGTTGCTGATAGCATTGGTTACCATAGCTGTTGTTGCCAACATAGACGGTTCCAAACAAGGCGCAGGGACTATGAAGACCCTTCTCTCTGTTTGTGGAAAAACAGAGGAACCAGAAAGTTGTGTCCATGTCTTAAAAAACGTTGGTGAAAGAGCCACAATTTTGGATTATGTTAAAGCTTCTATCAACGCAACCCTCGAAGAAATGCTGGTTGTGAACATGCCTAAACCTTATCTTGAAAAAAGCCTCACACCTCTACAGCAAATGTCATATAGAGATTGTTTGGAACTCTTAATTTTGGGAAAGGAAGAACTAGAATCCTTGTATACCATGATTACAAATTCGTTTGCTAACATGTCCATGATAGACCCTGATGATGTTATCAACAGCCTAAGTGCTGTCATTTCATACCAACAAACTTGTTCTGATTTGTTAATTAGAACAAACAACTATGAAATTTTGGGGTATTCATTGAAAATACCAATTATGGTTACAAGAATGACCTTAGCCATTGTTAATAATTTCAGTGAGTGGCCTAAAAATGGGGACCACAAGCAGAATGAAATTCCAACATTGTTTACAGGAGCAGAGCGCCAACTGATAGAGTTTCAAAGAAATCTTGGTGATAAGCAGCCATATGCAGTTGTGGCTCAAGATGGAAGTAGCCAATTCTCAACCATTTCTGAGTCACTCAATGCATGCTCAAAGAGTAACCAGAGTCCTTGTATTATTTACGTGAAAAAGGGTAAATATGAGGAAAGAGTGGTGGTTCCGAAGGATCTAAACCAAGTTGTCATGTATGGTGATGGCCCTGCAAATACCATTGTCACTGGAATCACCACAAGAGACCCCAACATGGTTACAACCACTCTCCGGGCAGCTACTTTTGTGGTAATGGGGAAAGGGTTTATATGCAAAAATATGGGTTTCACTGCCCCAGCTGATATTATAGGAGCACCAGCAGTTCTTGTCTTTTCTGATCATGCAGCATTCTTCAACTGCAAAATTGATGGTGAGGAAGGGAGCCTCTATGCAGTAGCCCAACGCCAATTCTACAGAGACTGTGAGATTCATGGGAGTGTGGACATCATCAAAGGAGACTCTGCAACTCTAATTCAGAACTCACAAATCATTGTGAAGCCTAGAAATTCTTCTCATTCAGTTTTAAGCAAAAATGTGGTAACTGCTCAATCAAGGTTGGACAAGTATGAGAGAACTGGTTTTGTGATTCAAAACTGCAGCATCACAGCACAAGGGGAAAGTGGCAATAGTCTTGTTGCTACAATTTATTTGGGCACCCCATGTAATGAATACTCAAGAACAATCATAATGGAATCATTTTTAGGAAATGTGATACATCCAGAAGGGTGGTGCAAATGGAGTGACGACTATGGCATTGAAACAGCAACATTCCGTGAGTTTAATAACAGAGGGCCTGCTGCAAAAACTTTTACGAGGGTCAATTGGGATAGCTACCGAACAATTATTCAGAGAAGTGAAATGGCGAGTTTCACAGCTACTCAGTTTCTTCAATCAGAAAAATGGTTGCAAAGTACAGGAATTCCGTACGATTCTGGATTTGTTTACCACAAGGAAAATGATGAGTATACACAACATGGGGCTGTGCGCAACCATGGATAA 1743 0.4016 MDCLGIRRSNYNGRHDDSKEKEEFILNIVIMVVSMLLIALVTIAVVANIDGSKQGAGTMKTLLSVCGKTEEPESCVHVLKNVGERATILDYVKASINATLEEMLVVNMPKPYLEKSLTPLQQMSYRDCLELLILGKEELESLYTMITNSFANMSMIDPDDVINSLSAVISYQQTCSDLLIRTNNYEILGYSLKIPIMVTRMTLAIVNNFSEWPKNGDHKQNEIPTLFTGAERQLIEFQRNLGDKQPYAVVAQDGSSQFSTISESLNACSKSNQSPCIIYVKKGKYEERVVVPKDLNQVVMYGDGPANTIVTGITTRDPNMVTTTLRAATFVVMGKGFICKNMGFTAPADIIGAPAVLVFSDHAAFFNCKIDGEEGSLYAVAQRQFYRDCEIHGSVDIIKGDSATLIQNSQIIVKPRNSSHSVLSKNVVTAQSRLDKYERTGFVIQNCSITAQGESGNSLVATIYLGTPCNEYSRTIIMESFLGNVIHPEGWCKWSDDYGIETATFREFNNRGPAAKTFTRVNWDSYRTIIQRSEMASFTATQFLQSEKWLQSTGIPYDSGFVYHKENDEYTQHGAVRNHG. 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05218 580 PANTHER PECTINESTERASE 34 551 - -
Seca2g05218 580 Pfam Pectinesterase 248 546 IPR000070 GO:0030599|GO:0042545
Seca2g05218 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 58 209 IPR035513 -
Seca2g05218 580 SMART PMEI_2 57 205 IPR006501 GO:0004857
Seca2g05218 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 210 IPR035513 -
Seca2g05218 580 Gene3D - 242 561 IPR012334 -
Seca2g05218 580 CDD PMEI-like_3 64 210 - -
Seca2g05218 580 Pfam Plant invertase/pectin methylesterase inhibitor 64 180 IPR006501 GO:0004857
Seca2g05218 580 SUPERFAMILY Pectin lyase-like 247 559 IPR011050 -
Seca2g05218 580 FunFam Pectinesterase 4 244 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05218 Seca-Chr2 138661342 138663391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05218 13 562 Carbohydrate Esterase AT3G05610 32.014 5.59e-87 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05218 K01051 - gmx:102665007 723.776