Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05207 ATGGCGAGGCTTTTCTGGGTTGGCATTGCAATAGGACTTGTTTTTTGCAACTGGGTTGATGGGTTTGTTGGATATGAACAATATCACTTCAATGAAACAGAGTTGTCTTTGCTTGAAGCTCATGAAGCATCTTTATCCTATGAAGGGACTGATCCACTTCTGGTAGGACTCACCCTTATTGAAGATGCTGCTGCTAAAGGAGCAGTCTGCTTGGATGGAACATTGCCTGGTTACCATTTGCATAGGGGATATGGATCAGGAGCAGACAGCTGGCTCATTAATTTAGAGGGAGGTGGATGGTGTAATAATATTAGAACATGTGTTTATCGTAAGAAAACCAGGCGTGGATCATCAGCATTCATGGAAAAGGAGATAGCATTTACGGGAATACTAAGTAATAAAGCTGAAGAAAATCCAGATTTTTTCAATTGGAACAGAGTAAAGCTTCGTTATTGTGATGGTGCCTCATTTGCTGGGGATGGTGAAGATCAGACTGCAGAACTGCAATTCAGAGGACAGCGTATTTGGGCAGCTGCAATGGAAGATTTGACGTCGAAGGGAATGCGTCTTGCCAACCAGGCTCTTCTTTCGGGATGCTCTGCGGGTGGCCTGGCTACTATTATACACTGTGATGAATTTCGAAGTCTCTTTCCAAGTTCTACTAAAGTGAAGTGTCTAAGTGATGCTGGGTTGTTTCTTGATTCGATTGATGTATCTGGCGGGCATACCCTCAGGAATTTATACAGTGGTGTTGTAGGATTGCAGGGAGCGCAGAAGAATCTACCTCAAATTTGTACTAATCACCTTGATCCCACCTCGTGCTTCTTCCCTCAGAACTTGATTGCCAGTGTTAAAACCCCACTATTTATTCTTAATGCTGCTTATGATTCATGGCAGATCCAGTCCAGTTTAGCTCCTCCATCAGCAGATCCCCATGGTTATTGGCATGAATGCAGATTAAACCATGCTAAATGTACTAGTTCACAAATCCAATTTCTGCAAGGTGGATTCAGGAATCACATGCTGCATGCTATTAAAGACTTCTCAAGATCAAATGGCAATGGATTGTTCATTAATTCATGTTTTGCTCACTGCCAAACAGAGAGGCAGGATACATGGTTTGCTGACAATTCTCCTGTTATTAGGGACAAGGCAATTGCTCTGGCTGTTGGAGACTGGTATTTCGACCGAGCAGGTGTTAAGGCCATTGATTGTCCTTACCCTTGTGATAATACATGTCACCATCTGGTTTTCAAATGA 1260 0.4286 MARLFWVGIAIGLVFCNWVDGFVGYEQYHFNETELSLLEAHEASLSYEGTDPLLVGLTLIEDAAAKGAVCLDGTLPGYHLHRGYGSGADSWLINLEGGGWCNNIRTCVYRKKTRRGSSAFMEKEIAFTGILSNKAEENPDFFNWNRVKLRYCDGASFAGDGEDQTAELQFRGQRIWAAAMEDLTSKGMRLANQALLSGCSAGGLATIIHCDEFRSLFPSSTKVKCLSDAGLFLDSIDVSGGHTLRNLYSGVVGLQGAQKNLPQICTNHLDPTSCFFPQNLIASVKTPLFILNAAYDSWQIQSSLAPPSADPHGYWHECRLNHAKCTSSQIQFLQGGFRNHMLHAIKDFSRSNGNGLFINSCFAHCQTERQDTWFADNSPVIRDKAIALAVGDWYFDRAGVKAIDCPYPCDNTCHHLVFK. 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05207 419 Pfam Pectinacetylesterase 53 398 IPR004963 GO:0016787
Seca2g05207 419 PANTHER NOTUM-RELATED 53 415 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05207 Seca-Chr2 138551786 138556541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05207 54 419 Carbohydrate Esterase AT1G57590 73.497 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05207 K19882 - gmx:100782401 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06547 8 159976011 159980837 Seca2g05207 2 138551786 138556541 PCT