Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05188 ATGAGAAACTGGAAAATGAAGCTGCTTCTTATTGCGCTGCTTGCCTTTGTCTCCGTGGTTAGATCTGAAACACATTCTCTCTCTCCACTGTCTTTCTGGGAAAACGATGTCGTTCCACTGTCAGGGAAGGGTTCCTCCTCCTCGCCCCAACCTCAACCTCTCATGGTGCCACTCACTCTTATTCAAGGAGCTGCTTCTAAAGGAGCTGTCTGTTTGGATGGAACGCTGCCTGGTTACCACTTTCATCCTGGATCTGGATCTGGTGCAAACAGTTGGCTCATTCAATTGGAGGGAGGAGGATGGTGTAACACCATCAGAAGTTGTGTCTTTAGAAAAACTACTCGTCGCGGCTCCTCAAAATACATGGAAAAGCAACTACCGTTCACGGGGATATTGAGCAACAAAGCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTCAAAGTACGGTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAAATGAGGCTGCACAGCTTCAATTTAGAGGACAAAAAATATGGCTAGCTGCAATGGAGGAATTAATGTCCAAGGGAATGAAGAATGCCAATCAGGCTCTTTTGTCTGGATGCTCTGCAGGCGGTCTGGCATCTATAATACATTGTGATGAGTTTCAGAGCTTGTTTCCAAAATCTACCAAAGTGAAGTGTTTGAGTGATGCAGGGTTTTTTCTTGATGCAACTGATGTATCTGGGGGGCGCACACTGAGAAATCTGTTTGGAGGTGTAGTTAACTTACAGGTAGTATTTAATGTAGTAAAAAATAGTCCAAATAGAATATAA 810 0.4395 MRNWKMKLLLIALLAFVSVVRSETHSLSPLSFWENDVVPLSGKGSSSSPQPQPLMVPLTLIQGAASKGAVCLDGTLPGYHFHPGSGSGANSWLIQLEGGGWCNTIRSCVFRKTTRRGSSKYMEKQLPFTGILSNKAEENPDFFNWNRVKVRYCDGASFSGDSQNEAAQLQFRGQKIWLAAMEELMSKGMKNANQALLSGCSAGGLASIIHCDEFQSLFPKSTKVKCLSDAGFFLDATDVSGGRTLRNLFGGVVNLQVVFNVVKNSPNRI. 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05188 269 Pfam Pectinacetylesterase 51 259 IPR004963 GO:0016787
Seca2g05188 269 PANTHER NOTUM-RELATED 17 262 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05188 Seca-Chr2 138364512 138368082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05188 6 260 Carbohydrate Esterase AT3G05910 67.969 5.23e-124 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05188 K19882 - gmx:100785270 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06547 8 159976011 159980837 Seca2g05188 2 138364512 138368082 ECH
Seca2g05188 2 138364512 138368082 Seca8g06547 8 159976011 159980837 ECH
Seca2g05188 2 138364512 138368082 Seca2g05188 2 138364512 138368082 ECH
Seca12g00539 12 4799408 4806135 Seca2g05188 2 138364512 138368082 ECH
Seca8g06576 8 160217070 160222304 Seca2g05188 2 138364512 138368082 PCT