Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05164 ATGGTTTCACGGCTGAAGCATGACAATTTTGTTCAATTGCTTGGTTATTGCGTTGATGGAAACTCACGAGTTCTTGCTTATGAGTTTGCATCTAATGGGTCTCTTCATGATATTTTACATGGCAGAAAAGGTGTTAAAGGAGCACAGCCCGGTCCTGTTCTGACATGGGCACAGAGGGTTAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGAGTACTTGCATGAGAAGGCTGATCCCCACATTATCCACCGGGACATCAAGTCAAGCAATGTACTAATCTTCGATGATGATGTTGCTAAAATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGACATGGCAGCACGTCTTCATTCCACCCGTGTCCTTGGAACCTTTGGTTATCATGCACCAGAGTATCTAATCAAAGTAACTAATGTGTTTCAGGCTACACCAAAACTCAGTGAGGATAAAGTCAGACAGTGTGTAGATGCAAGACTAGGAGGAGAATACCCGCCCAAAGCTGTTGCTAAGTTGGCCGCCGTTGCTGCTCTATGTGTGCAATATGAAGCTGATTTCAGGCCAAACATGAGCATTGTAGTCAAGGCTCTTCAGCCTTTGTTGAATGCAAGACATGGACCTGCTGGTGAAACACCAAACTAA 642 0.4455 MVSRLKHDNFVQLLGYCVDGNSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLTWAQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYLIKVTNVFQATPKLSEDKVRQCVDARLGGEYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQPLLNARHGPAGETPN. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05164 213 Gene3D Transferase(Phosphotransferase) domain 1 140 206 - -
Seca2g05164 213 Gene3D Transferase(Phosphotransferase) domain 1 31 139 - -
Seca2g05164 213 SUPERFAMILY Protein kinase-like (PK-like) 2 200 IPR011009 -
Seca2g05164 213 Pfam Protein kinase domain 2 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g05164 213 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g05164 213 ProSitePatterns Serine/Threonine protein kinases active-site signature. 81 93 IPR008271 GO:0004672|GO:0006468
Seca2g05164 213 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Seca2g05164 213 SMART serkin_6 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g05164 213 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05164 Seca-Chr2 138123724 138125731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05164 1 205 Receptor kinase-like Gene Family AT3G58690 41.250 1.37e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Seca2g05164 Pkinase 9.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05164 K13436 - gmx:100813950 379.407