Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05152 ATGGAAGAAACATTTGTACCCTTTGAGGGGATCAAGAATGATCTTAGAGGAAGGTTAATGTGCTACAAACAAGATTGGACAGGCGGAATCAGAGCAGGATTAAGGATTTTGGCCCCCACCACATACATATTCTTTGCTTCCGCAATACCTGTCATTTCATTTGGTGAACAGCTAGAGAGAAATACTGGTACTGAATATTCTAACTTCAGTAGATTCATCTTTTTCATGAGAAATGGTGTTCTAACAGCTGTTCAAACTTTGGTATCCACTTCAATATGTGGCATCATACACTCAATCATTGGTGGTCAACCTTTATTGATTTTAGGAGTGGCAGAACCTACCGTGATCATGTACACATTCATGTTCAATTTTGCAAAAGAGAGACCAGAGTTGGGCAGGGACCTGTTTCTGGCATGGACTGGATGGGTATGTGTCTGGACTGCACTGTTGCTATTCTTATTTGCCATCTTAGGGGCTTGCTCCATCATCAACAGGTTTACCCGTATTGCAGGAGAATTGTTTGGCCTGCTTATTGCAATGCTTTTCATGCAGCAAGCTATCAAGGGACTTGTGGATGAATTTCGCATACCTGGGAGAGAAAATCCAAAAGCAGTTGAATTTACAACTCCATGGAGGTTTGCCAATGGGATGTTTGCTTTAGTCCTTTCATTTGGCCTTCTCCTCACTGCATTAAGAAGCAGAAAGGCTAGGTCATGGCGTTATGGTAGTGGTTGGATTCGCAGCCTCATAGCTGACTATGGTGTGCCGCTTATGGTCCTAGTTTGGACAGGTGTATCCTACATACCATCTGGAAATGTTCCACATGGTATCCCAAGGCGCCTTTTTAGCCCAAATCCATGGTCACCTGGTGCATATGAGAATTGGACAGTTATTAAGGATATGGTCCATGTTCCTATTGTCTACATAATTGGAGCATTTATCCCAGCAACCATGATTGCAGTGCTTTATTACTTTGACCACAGTGTGGCATCCCAGCTTTCTCAGCAGAAAGAGTTCAATTTGAGAAAGCCATCTTCTTACCATTATGACTTGCTCCTTTTGGGATTTTTGACCTTAATGTGTGGCCTTATTGGAATTCCTCCTTCAAATGGAGTCATACCACAATCTCCAATGCACACAAAGAGTTTGGCAACTCTTAAACATCAGTTGCTTCGTAACAGACTGGTGATAACTGCTCGAAAAAGTATTAGCAAGAATGCCAGTTTAGGACAGTTATATGGAAATATGCAAGAAGTCTACCATCAAATGCAGACGCCTCTTATTTACCAGGACCCCTCTGCTAGAGGACTAAAAGAATTAAAAGAATCAACCATTCAAGCAGCTACCAGCATGGGAAACATGAACGCCCCCATAGATGAGAGTCTGTTTGATATTGAGAAAGAAATAGATGACCTACTTCCTGTTGAGGTAAAGGAACAGCGTCTCAGTAACTTGCTTCAATCAGTAATGGTAGGAGGATGCGTTGCAGCCATGCCTATCCTCAAGAAGATCCCAACCTCAGTCCTTTGGGGCTACTTTGCCTTCATGGCCATTGAAAGTTTGCCAGGAAACCAGTTTTGGGAAAGGATCCTATTACTCTTCACTGCACCAAGCAGGAGATATAAGGTGCTTGAGGATTACCATGCTACTTTTGTGGAAACAGTTCCTTTCAAGACAATAGCAACATTCACCATTTTCCAAACCATTTATCTTCTGATATGTTTTGGACTAACTTGGGTCCCTATTGCTGGGGTCATGTTTCCTTTGATGATCATGCTCTTAGTTCCATTAAGACAATATTTTCTCCCCAAATTTTTCAAAGGGGCACACCTTCAAGACTTGGATGCAGCAGAGTATGAAGAGCAAACTGCTTTACCATACAATCTTGCAACACAATCTGAATTTGGAGCTGGTGCTTCTCATGCTGGAGAAGGTGAGATCCTAGATGAAGTTATCACTAGAAGCCGTGGTGAGTTTAGGCACACTAGCTGTAGTCCAAGGATCACAAGCTCAACTCCAACACCAGGAAATGATCCTAAGAGCCATCTAAGCCCACGCCTCTCTTTTAGTTCTCGCGCGGGTGAGCTCACCACTGAGCAAAGTCCTCGCTCTGGTGCAAGAGGTCACTATAGTCCAAAGGCCAGAGAAGTGAAATTATCAAATCTGGGAAGAAGTCCTCTTAACCCTGATTCAAAACAGCAGGACAACAAATAA 2214 0.4286 MEETFVPFEGIKNDLRGRLMCYKQDWTGGIRAGLRILAPTTYIFFASAIPVISFGEQLERNTGTEYSNFSRFIFFMRNGVLTAVQTLVSTSICGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRDLFLAWTGWVCVWTALLLFLFAILGACSIINRFTRIAGELFGLLIAMLFMQQAIKGLVDEFRIPGRENPKAVEFTTPWRFANGMFALVLSFGLLLTALRSRKARSWRYGSGWIRSLIADYGVPLMVLVWTGVSYIPSGNVPHGIPRRLFSPNPWSPGAYENWTVIKDMVHVPIVYIIGAFIPATMIAVLYYFDHSVASQLSQQKEFNLRKPSSYHYDLLLLGFLTLMCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVITARKSISKNASLGQLYGNMQEVYHQMQTPLIYQDPSARGLKELKESTIQAATSMGNMNAPIDESLFDIEKEIDDLLPVEVKEQRLSNLLQSVMVGGCVAAMPILKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTIYLLICFGLTWVPIAGVMFPLMIMLLVPLRQYFLPKFFKGAHLQDLDAAEYEEQTALPYNLATQSEFGAGASHAGEGEILDEVITRSRGEFRHTSCSPRITSSTPTPGNDPKSHLSPRLSFSSRAGELTTEQSPRSGARGHYSPKAREVKLSNLGRSPLNPDSKQQDNK. 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05152 737 MobiDBLite consensus disorder prediction 658 737 - -
Seca2g05152 737 FunFam probable boron transporter 2 18 60 - -
Seca2g05152 737 Gene3D Helical hairpin bin 18 60 - -
Seca2g05152 737 Pfam HCO3- transporter family 216 388 IPR011531 GO:0006820|GO:0016020
Seca2g05152 737 Pfam HCO3- transporter family 7 195 IPR011531 GO:0006820|GO:0016020
Seca2g05152 737 Pfam HCO3- transporter family 475 565 IPR011531 GO:0006820|GO:0016020
Seca2g05152 737 PANTHER ANION EXCHANGE PROTEIN 2 623 IPR003020 GO:0005452|GO:0006820|GO:0016020
Seca2g05152 737 MobiDBLite consensus disorder prediction 662 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05152 Seca-Chr2 137975664 137980153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05152 1 733 Antiporters AT2G47160 79.435 0.0 1166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05152 K24194 - gmx:100776705 1307.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05152 2 137975664 137980153 Seca2g05152 2 137975664 137980153 ECH