Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05143 ATGAACTACGTCGTTTCAAATGGCATTTGGCAGGAAGCAATCAAGCAAGGCAGTTCTTACGACGTCGTTGCCAATCAAGTATCGACAGTGGAGAAAGATATCCTTGGATTGCCCAAAAACTCATTCCCAGTTGTAGAGAAGAAGTCTCGACCTCCCAAAGAGTCTCAGAGAAAACCAGATGGCATTTCGCGCGAGGTCTATGCGCTTACTGGTGGAATGCCACCTCTTATGCCTGCAATTGATGCCTCTCAATTGAAAAAGAAGCCTCCTTCTGACGAAAAGATCACTTGGCAATGGCTTCCTTTCACCAATTCTGCTCGTAAAGATAATCTTCACCTTTACCATTGGGTCCGAGTCGTCAATGGTGCTCCACCTACGGGGGACTATTCTTTTGCTAAGTATAACAAGTCTGTTGACATTATCAAGTACACGGATGAGGAGTACGACAAGTATTTGACAGATCCTATGTGGACCAAGGAGGAGACAGATAAACTATTTGACTTGTGTGAGAGGTTTGATCTCCGATTTATTGTAATAGCTGATAGGTTCCCGTCATCTCGGACTGTAGAGGAATTAAAGGATCGATATTATAGTGTATCGCGGGCTATATTAATTGCTAGGGCTCCGTCTTCTGGGGATGTTGCGGCAAATCCTCTTGTTAAGGAACCATATAATGTTTCACAAGAAATGGAGCGGAAACGAGCACTGTCCATGGTCCTCTCTCAAACAAGGCAACAAGAGCGAAAAGATGAAGAGGTTCTCATTGAAGCAAAAAGAATAGCTGAGTTACGCATGCCTTCTAAGGCTGCGGAAGAGACTCAGTTACCTGTTGCTTCAAATGCTGGTGCAGAAGTTTCAGAGAGGGCTGTCCCTGGTGAAACTGTATCTCGAATGAATGTGCAACTTCCATCAATGGTTGTGCCAGATAATGCATCTACTCTCGCTTCTCTTCGCATTGTAAGTTATACAGAAGGCTTCCAGTTATGCATCCATTGA 996 0.4428 MNYVVSNGIWQEAIKQGSSYDVVANQVSTVEKDILGLPKNSFPVVEKKSRPPKESQRKPDGISREVYALTGGMPPLMPAIDASQLKKKPPSDEKITWQWLPFTNSARKDNLHLYHWVRVVNGAPPTGDYSFAKYNKSVDIIKYTDEEYDKYLTDPMWTKEETDKLFDLCERFDLRFIVIADRFPSSRTVEELKDRYYSVSRAILIARAPSSGDVAANPLVKEPYNVSQEMERKRALSMVLSQTRQQERKDEEVLIEAKRIAELRMPSKAAEETQLPVASNAGAEVSERAVPGETVSRMNVQLPSMVVPDNASTLASLRIVSYTEGFQLCIH. 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05143 331 Gene3D - 126 212 - -
Seca2g05143 331 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 32 290 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Seca2g05143 331 FunFam DNA methyltransferase 1-associated protein 1 125 212 - -
Seca2g05143 331 MobiDBLite consensus disorder prediction 43 62 - -
Seca2g05143 331 SUPERFAMILY Homeodomain-like 153 202 IPR009057 -
Seca2g05143 331 CDD SANT_DMAP1_like 157 199 - -
Seca2g05143 331 MobiDBLite consensus disorder prediction 46 61 - -
Seca2g05143 331 SMART sant 153 202 IPR001005 -
Seca2g05143 331 Pfam SANT/Myb-like domain of DAMP1 129 203 IPR032563 -
Seca2g05143 331 MobiDBLite consensus disorder prediction 271 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05143 Seca-Chr2 137851198 137854751 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca2g05143 SANT_DAMP1_like 5.5e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05143 K11324 - gmx:100818926 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05143 2 137851198 137854751 Seca2g05143 2 137851198 137854751 ECH