Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05127 ATGGCCAGCTTGACTCGGAGCTCACTGTCTCAACCCAAAGCTATCTCCTTAATGAAATTTCCGAGTTTGGATCCACCTTCATTTTCAGTTACTAGCGGTCCTTGCTCCCAGTGCCGCTTCTGCTATTCGGGGCAATCAACGGCGTCAGTCATGCAAATCGATACGTTGGAAAATGTTCAAACCATATTGCTGAAATGGATGCTTATATTATCTTGCCTGGTATTTATGGTCGAGTTTGGTATAAATGATAAAACAATGGACCCACCATCGCTGTCTGCGGCTAGATCACCTTTGGTCTCTTATGTTGTCCACGATCTGCCTCTACCATCAAATCCCCATAGGTTAAAGCATGTGCATTCTCATGGTGCACCAATTGCAGCACCGACCAATCCCCCTTCCTATGGTCATTTTGCAAATATTGGCCAACCCCCTAAAAGATCACATTTCTCCATACCATTCAAGAAGAGGAGTGAATGGAAACCTCCGATTTCTGGCTTTAAAGATATTGCTCCTATTCATTCTACTGCAGCTGCAGTCCCTTCTGCTTTGGCTCAGCCACCATTGTCCCCTTATGTTTCCAGCATCAGTTTCTCTGCCTATGAAGCTTCTAAAATAAACACTTCACTTTCAAAGCAGAAGGTTCAACTAGACCCTGAATTAATAGGTGGATACAGACTTCTCAATATAACGCGGTTTGAACCTCCGCCTCCTTCTCAAGCTCCTACTTTAGTTGCATCGCTTGTGAAAGCACCTTTATATCATTCACCTACAGCTACATCATCGAGTTATTTGAATAGGGGAAGGCATTCAAATCTATTTCTTATTCTTGGAATTGCTATTGGCATACTCTTCACTGCTATCGTATCTGTATTTATATTTTGTTGTACGTTGTTGCCGAAGGAAAAAACACCTCCCACAGAAACGGAAAAGCCAAGGATGGAAAGTACTATTTCTGCTGTGGGTTCTATTCCCCACCCAAGTAGCACACGATTTATTGCTTATGAAGAACTTAAAGAAGCAACAAACAATTTTGAACCAGCGAGTGTACTTGAAGAAGGAGGGTTTGGTAGAGTTTTTAAAGGTGTCTTAAATGATGGTACTTCTATAGCAATTAAGAGACTTACAAGTGGAGGGCAACAAGGTGACAAAGAGTTTCTGGTTAAGGTTGAAATGCTTAGCCAATTGCATCACCGTAACCTTGTAAAACTGGTGGGATACTATAGTAGTCGTGATTCATCACAAAATCTACTTTGCTATGAGCTTGTCCCTAATGGAAGTTTGGAAGCCTGGCTTCATGACTCACAGCCCTGTGTAATACACAGAGATTTCAAGGCATCCAACATATTGCTTGAGAACAATTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAGACACCTGAAGGAAGATCTAATTATTTGTCTACCCGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCCATGATTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGGGTTGTCTTGCTAAAACTGCTTACTGGAAGGAAACCTGTTGATATGTCACAACCAACTGGACAAGAGAACCTTGTTACTTGGGCTAGGCCAATCCTGAGAGACAAGGACCGGTTGGAAGAGATTGCTGATCCCAAACTTGGGGGAAAGTATCCAAAGGAAGATTTTGTTCGTGTGTGCACTATTGCTGCAGCCTGTGTTGCTCCTGAAGCAAGCCAACGACCCACAATGGGTGAAGTGGTACAGTTACTTAAATGGTGCAGCACATCACAGAATATCAAGATTCTGTGTCCTTACTCTGGTCTAAGTGCTGCCTTTGACAATGAGAACATTTCTAGGACGGTGATTTTCTCTTAA 1872 0.4252 MASLTRSSLSQPKAISLMKFPSLDPPSFSVTSGPCSQCRFCYSGQSTASVMQIDTLENVQTILLKWMLILSCLVFMVEFGINDKTMDPPSLSAARSPLVSYVVHDLPLPSNPHRLKHVHSHGAPIAAPTNPPSYGHFANIGQPPKRSHFSIPFKKRSEWKPPISGFKDIAPIHSTAAAVPSALAQPPLSPYVSSISFSAYEASKINTSLSKQKVQLDPELIGGYRLLNITRFEPPPPSQAPTLVASLVKAPLYHSPTATSSSYLNRGRHSNLFLILGIAIGILFTAIVSVFIFCCTLLPKEKTPPTETEKPRMESTISAVGSIPHPSSTRFIAYEELKEATNNFEPASVLEEGGFGRVFKGVLNDGTSIAIKRLTSGGQQGDKEFLVKVEMLSQLHHRNLVKLVGYYSSRDSSQNLLCYELVPNGSLEAWLHDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQTPEGRSNYLSTRVMGTFGYVAPEYAMIGHLLVKSDVYSYGVVLLKLLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEEIADPKLGGKYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQLLKWCSTSQNIKILCPYSGLSAAFDNENISRTVIFS. 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05127 623 Gene3D Phosphorylase Kinase; domain 1 307 421 - -
Seca2g05127 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Seca2g05127 623 Gene3D Transferase(Phosphotransferase) domain 1 426 602 - -
Seca2g05127 623 FunFam Receptor-like serine/threonine-protein kinase ALE2 324 421 - -
Seca2g05127 623 Pfam Protein kinase domain 431 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g05127 623 FunFam Receptor-like serine/threonine-protein kinase ALE2 422 602 - -
Seca2g05127 623 PANTHER OS01G0750732 PROTEIN 197 594 - -
Seca2g05127 623 SUPERFAMILY Protein kinase-like (PK-like) 319 590 IPR011009 -
Seca2g05127 623 ProSiteProfiles Protein kinase domain profile. 344 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05127 Seca-Chr2 137707044 137713037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05127 193 623 Receptor kinase-like Gene Family AT4G02010 62.475 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Seca2g05127 Pkinase 3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05127 - - gmx:100793528 670.618