Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05119 ATGGCCTCCACAATTACTGGCTCTACTTCTGAAACTCCAGAACAACATGGACAAGAAGCAATGGGCACTGTTGGAGCCTTGGTTGTGGCCAAGGTAAATTTATTGATACAGAAAATCGAAGAGAAACGAATTGAATCAATAAAAGAAAAACTTCAAAGGAATAAGAAGAATCTACAATGTCAAGTTGCAAATGTCTTGTCAGTAATATCAACAAGGGACTCATTACAAACTGACAAGAATACCATTCAAGTGCTTTCTTCTAGAATTGATCATCCTCTACGTAAGTTTGGTGGTATCTCTCGAGATTTGGGAGAGAATGAATACATAAATAATCGAGACATCATATTTTCAAGAAGCATAAAGATCCCATATATAGAAAGATTGCCACCTTTTACATTTTGGATACATATGCCCAGAAATCAGAAAATGCTAGAAGAGCAATCTGTCATAGGGAAACGACAAATATACTATGACAAACATGGTGGTGAGACACTGGTGTGTAGTGATAGTGAGGAGGAATCAACAGAAGTTGACGAAGTCAAACATGACTTTAATGAGATTGAAGATCAAATTTTATGGATGGCATTTGAGGAACATGGGTTCACTGAGGAGGTGTTGAATATTGTTTCGAAGCTTGTCAGAGGTACCATTTCAGAAATCCAGGAAAGGTATAAATATCTCAAGGAAAAGAACACAAGGAGGTTGGACCAGCATTCTAAAGATCCTGGAGAACGTGAATCTCTTATTGGCATATCTTTGGATAAAACCTTGAATGATGCCTTGGATACTTTTGATAACCTTTTTTGCCAGCAGTGCTTTCAAATCTTTGATTGTCCTCTACACGGTTGCTCACAACCTATATGTCCTAGTGAAAAGCAGAAAGTTTGGTTTGAACCAGAAGGTGACAGGAAACCATGCAGTGATCATTGTTACCTTAAGTTAACGGATGTCAAGCTTTTATCAGAAAAATCTCCTTCAAAGTCTTCTCAAGATAGAAAAAAGAAAACAATGGAAGAGGTGGATGGGATATTGGCATGGTCCAATGCAAAGGAGCCTAGTAATCAAAGTTATAATGTTATCAAGGAGAAAGAAAGATGTGATTACGTGACAACACCTTTTATAAAAGAAGTTGGATGTCATGAAGATCTAAATTCAAATTCAAATATGCTTGTATCAGTATCAAAAACTATAGGAAAACATAAGGACATGCATCTATCAAACTTAACATTATGTGACTCAACTTTGCCTCCTGATGAGTCTAAGAGTTCTTGTAAGAAGTTGAAGAGAATCCAAAATGATATAGTTACGACAATTGGTGATGATAACAAGAACCTTAATTTGGATTCTTGTGATGATGAAAACCACACAATTACTTATGCAACTTTGAAAAATCTTATTGAACACACTTCAAATAAATTGATAATTTCGGATAGCACATGCCATGGTGTGTGTGAAAAAAGTGTTGGAGATGGACAAAAAGATATCACCAATGAGATAGAAATTGAGCACTCGTCTGATTCAATGGAAGTGCAAGTTAAAGAGATGCTAAGTTTCTCAGATTGGAAACCTCTAGAGAAAGAATTATATTTGAAAGGAGTAGAAATATTTGGGAGAAATAGCTGCCTTATAGCACGAAACTTACTTCCTGGCTTGAAGACCTGCATGGAAATAGCTAGCTACATGTATGCTGGAGAAGTGTTAGTGCCCGACAGATCAATACTAAGTTCAATCATGGACAAAAATGGACAAATTAATGCAAATTACACAGACCGAGAGATGGCATCAGGGTCACGGTTGCTGCGAAAAAGGCGTAAAACTAGAAAGTTTAAATATTCTTCCAAGTCTGCTGGCCTCCCATCTACATGGCAAAGAATTACTGCTGGGAAAAGTGAAGCTTACAAGCAGTATAAACCTTGTGGATGTCAGGGAATGTGTGGAAAGCAATGTCCTTGTCTTCAAAATGGATCATGCTGTGAAAAATATTGTGGGTGTTCAAAGCTCTGTAGAAATCGGTTTAGAGGATGTCGTTGTGCTAAGAGTCAATGTAAAAGTCGACAATGTCCATGCTTTGCAGCAGAAAGGGAATGTGACCCAGATGTCTGTCGAAATTGCTGGGTTAGTTGTGGCGGTGGTTCATTAGGAGAGCCACCTCGACGTGGAGATGGTCAATGTGGAAATATGAGGATTCTTTTAAGGCAAAAACAGAGGATTCTTTTGGGAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTAAAGGACCCAGCTAACAAAAATGATTACCTTGGAGAGTACACGGGTGAATTGATCTCTCATTTAGAAGCTGATAAGCGTGGGAAAATATATGATCGTGCAAACTCCTCTTTCCTTTTTAACTTGAATGATCAGGCAAGTGTTTCTTTAATGTATGTTGTTGATGCTTATCGCAAAGGAGACAAGTTGAAATTTGCTAACCACTCGATAAAACCCAATTGTTATGCAAGGATTATGCTTGTTGGCGGGGATCATCGAGTAGGCATATTTGCCAAGGAACGCATTGAAGCTGGTGAGGAGCTTTTCTATGATTATTGCTATGGTCCAGGGGAAGCACCATCATGGTTTTAA 2601 0.3822 MASTITGSTSETPEQHGQEAMGTVGALVVAKVNLLIQKIEEKRIESIKEKLQRNKKNLQCQVANVLSVISTRDSLQTDKNTIQVLSSRIDHPLRKFGGISRDLGENEYINNRDIIFSRSIKIPYIERLPPFTFWIHMPRNQKMLEEQSVIGKRQIYYDKHGGETLVCSDSEEESTEVDEVKHDFNEIEDQILWMAFEEHGFTEEVLNIVSKLVRGTISEIQERYKYLKEKNTRRLDQHSKDPGERESLIGISLDKTLNDALDTFDNLFCQQCFQIFDCPLHGCSQPICPSEKQKVWFEPEGDRKPCSDHCYLKLTDVKLLSEKSPSKSSQDRKKKTMEEVDGILAWSNAKEPSNQSYNVIKEKERCDYVTTPFIKEVGCHEDLNSNSNMLVSVSKTIGKHKDMHLSNLTLCDSTLPPDESKSSCKKLKRIQNDIVTTIGDDNKNLNLDSCDDENHTITYATLKNLIEHTSNKLIISDSTCHGVCEKSVGDGQKDITNEIEIEHSSDSMEVQVKEMLSFSDWKPLEKELYLKGVEIFGRNSCLIARNLLPGLKTCMEIASYMYAGEVLVPDRSILSSIMDKNGQINANYTDREMASGSRLLRKRRKTRKFKYSSKSAGLPSTWQRITAGKSEAYKQYKPCGCQGMCGKQCPCLQNGSCCEKYCGCSKLCRNRFRGCRCAKSQCKSRQCPCFAAERECDPDVCRNCWVSCGGGSLGEPPRRGDGQCGNMRILLRQKQRILLGKSDVAGWGAFLKDPANKNDYLGEYTGELISHLEADKRGKIYDRANSSFLFNLNDQASVSLMYVVDAYRKGDKLKFANHSIKPNCYARIMLVGGDHRVGIFAKERIEAGEELFYDYCYGPGEAPSWF. 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05119 866 SMART CXC_2 670 707 IPR033467 -
Seca2g05119 866 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 2 866 IPR025778 GO:0031519
Seca2g05119 866 Coils Coil 170 190 - -
Seca2g05119 866 SUPERFAMILY SET domain 637 859 IPR046341 -
Seca2g05119 866 SMART sant 517 567 IPR001005 -
Seca2g05119 866 SMART sant 180 230 IPR001005 -
Seca2g05119 866 ProSiteProfiles CXC domain profile. 622 721 IPR026489 -
Seca2g05119 866 Gene3D SET domain 636 857 IPR046341 -
Seca2g05119 866 CDD SET_EZH 735 857 - -
Seca2g05119 866 FunFam Putative histone-lysine N-methyltransferase EZH2 636 858 - -
Seca2g05119 866 ProSiteProfiles SET domain profile. 735 856 IPR001214 GO:0005515
Seca2g05119 866 Pfam SET domain 746 855 IPR001214 GO:0005515
Seca2g05119 866 Coils Coil 37 68 - -
Seca2g05119 866 Pfam CXC domain 674 705 IPR041355 -
Seca2g05119 866 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 30 862 IPR045318 GO:0006338|GO:0042054
Seca2g05119 866 SMART set_7 735 862 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05119 Seca-Chr2 137653018 137659639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05119 734 859 C2H2 Transcription Factor Family AT2G23740 27.737 1.57e-09 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Seca2g05119 SET 8.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05119 - K11430 gmx:100808730 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05119 2 137653018 137659639 Seca2g05119 2 137653018 137659639 ECH
Seca8g06661 8 161191192 161201482 Seca2g05119 2 137653018 137659639 PCT