Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05114 ATGGCTTCAATTCAACGACCGGCGAGTTCCGGATCTGAAGGAGGAGATCTGAAACATGGCGCCATAGACGAGAGGAAGAGGAAGAGGATGCTGTCGAACCGTGAATCCGCGAGGCGGTCACGGATGAGAAAGCAGAAGCAGATGGAGGATTTGAACGATGAAGTCGGCAAATTGCAAACCGCAAATATGAAGCTGGCGGAGACCATTAAGGCAAAGGAAGAAGCCTGTGTTGAAACTGAAGCAGCTAACTCCATCCTCAGGGCTCAGGTTATGGAATTGGGTGATCGATTGCGATTTCTGAACTCTATTCTTGAGATAGCTGAAGAGGTTAGTGGATTCTCTGTTGAGATCCCTGAGATTCCAGATCCTCTTCTTAAACCATGGCAGATTCCTCACCCCACACAACCAATCATAGCTTCTGCAGACATGTTCCTGCATTGA 441 0.483 MASIQRPASSGSEGGDLKHGAIDERKRKRMLSNRESARRSRMRKQKQMEDLNDEVGKLQTANMKLAETIKAKEEACVETEAANSILRAQVMELGDRLRFLNSILEIAEEVSGFSVEIPEIPDPLLKPWQIPHPTQPIIASADMFLH. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05114 146 CDD bZIP_plant_GBF1 26 76 IPR045314 GO:0003700|GO:0006355
Seca2g05114 146 MobiDBLite consensus disorder prediction 17 53 - -
Seca2g05114 146 MobiDBLite consensus disorder prediction 1 53 - -
Seca2g05114 146 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 140 - -
Seca2g05114 146 Pfam bZIP transcription factor 25 76 IPR004827 GO:0003700|GO:0006355
Seca2g05114 146 Coils Coil 34 68 - -
Seca2g05114 146 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 70 IPR004827 GO:0003700|GO:0006355
Seca2g05114 146 Gene3D - 23 78 - -
Seca2g05114 146 SUPERFAMILY Leucine zipper domain 25 73 IPR046347 GO:0003700|GO:0006355
Seca2g05114 146 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
Seca2g05114 146 FunFam BZIP transcription factor 23 74 - -
Seca2g05114 146 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05114 Seca-Chr2 137613692 137614132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05114 1 144 bZIP Transcription Factor Family AT3G62420 54.167 2.41e-49 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca2g05114 bZIP_1 3.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05114 K25786 - gmx:780550 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06668 8 161245990 161246421 Seca2g05114 2 137613692 137614132 PCT