Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05082 ATGGCTGCAGAGGCGGCATTGTCCTTTTCTGTGGCATCGGTTGTGGAGGATGTGCTTCAACAACACGGTCCTCGCCTCAAAGATCTTGATTTGCAATCTAGGAAAGCTGAAGAAGCTGCATCAAGAAGGTATGAAGCAGCAGGGTGGCTTAGAAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCAGAGCCCTCTGAGGAAGAGTTTCGGCTTGGTTTGAGAAGTGGGATTATCCTTTGTAATGTTATTAATAAGGTTCAATCCGGGGCTGTGCCTAAGGTTGTGGAGAGTCCTGTTGATTCTGCTCTGATCCCTGATGGGGCACCATTATCCGCATATCAATATTTCGAAAACGTGAGGAATTTCTTGGTGGCTGTCCAAGAAATTGGACTTCCTACATTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCTTCCAGGATTGTGAACTGCGTCTTGGCCCTTAAATCCTATAGTGAATGGAAACAGAATGGGGCAAATGGTGCCTGGAAATTTGGTGGAACTCTCAAACCTACTATCTCTGCAAAATCTTTTGTGAGAAAAAACTCAGAGCCATTTACTAACTCCTTGTCAAGGACTTCATCAATCAATGAAAAATCTCTGGCTACTCTTAACTCTGACGTTGAGTCTAATAAAATGCCTGGTTCCCATTCTTTGAGTATGCTTATTCATTCAATTTTATCAGATAAGAAGCCAGAAGAAATTCCAATGTTGGTTGAATCTGTTTTGAACAAGGTTGTAGAGGAGTTTGAGCATCGTATTGCAAGCCAAGGTGAACAGACAAAAATAACTTCAAGAGATTCTGTTCCTGAAAGCAACGGGTCTGTAACAAAGTTTGTTAGGGCAGATAAAAAGGTGGATAACAAAACTCATATGGTAACGAAGAAAGAGGATTGCATTCAAAAAAATCGTGTTGCTGCTGAGGAATTGCAAAGCCACCTTCTGAAGCAGCAGACACTCTTTGATCAACAACAAAGAGATGTTCAAGGGCTAAAGCTTACTCTTCACACCACTAAATCTGGTATGCAGTTAATGCAAAAGAAATTTCAGGAGGAATTTTCCAATCTTGGCATGCACATTCATGGCTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGCAAACTATACAATGAAGTACAGGATCTTAAGGGAAGTATTAGGGTGTACTGTCGAGTAAGACCCTTCTTTCCAGGACAAGCAAACCAATTGAGCACAGTAGAAAATATAGAAGATGGAACTATCACAATTGATGTTCCTTCAAAGAATGGGAAGGGACGCAGATCCTTCAACTTCAACAAAGTCTTTGGACCATCTGCAACCCAAGCGGAGGTCTTCTTTGATATGCAGCCACTTATTAGGTCTGTTCTTGATGGTTATAATGTTTGCATATTTGCATATGGCCAAACTGGATCAGGAAAAACTCACACCATGACTGGACCGAAAGAGATCACAGAGAAAAGCCAAGGTGTAAATTACAGGGCTCTAGGCGATTTGTTTCTTATAGCAGATCAAAGAAAGGACACTTTCCACTATGATGTTTCTGTTCAAATGATTGAGATATATAATGAGCAAGTCAGGGATCTACTGGTCACTGATGGATGTTTGTCCTTAACTATTGATACATTAGAAATTCGTAGCAGTTCTCACAAAGGGCTCAGCGTGCCAGATGCAAGCCTTGTCCCTGTGTCATCAACTCTTGATGTTATTGAACTAATGAACCTTGGGCAAAGGAACCGAGCTGTTGGAGCAACAGCCCTTAATGACCGCAGTAGCCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACATCTGGAGCTATCCTTCGTGGATGCATGCATTTGGTTGACTTGGCAGGAAGTGAGAGGGTGGATAAATCTGAGGCCACAGGAGATAGACTGAAAGAGGCACAGCATATTAACAAATCTCTCTCAGCTTTGGGTGATGTCATTGCTTCCCTTGCTCTGAAGAACTCACACGTTCCTTATAGAAATAGTAAACTCACACAACTTCTCCAAGATTCACTTGGAGGACAGGCTAAGACACTAATGTTTGTTCACATAAGTCCAGAGACTGATGCTATTGGAGAAACAATTAGCACCTTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTTGGTGCTGCCCGAGTAAACAAAGATAGTGCAGATGTTAAGGAGCTCAAAGAACAGATTGCCAACCTTAAGGCTGCACTGGCAAGAAAAGAAGGGGAATCAGAACATTCTTTATCTAGCAGCTCTGACAAATACAGAACAAAGGCTAGCAACCTATCACCTTATCATATAAACCAGCAGGTTGCAGACACTAGAGATCCACTTGGATGCCGGCGACCAATGGTTGAAGTTGGCAACATAGATGTATGTATATTTCATTTCCTCATGCAGCTTCAGAGTAATACAACATTGAGGCACAAAACTCAGAGCTTTGATTTTGATGAGATATCAGCAAATTCACCACCATGGCCCCCAGTGAATAATGTTGGACAAAACTATGGGGAGGATGAGAAAGAAACAGGTTGTGGAGAATGGGTTGATAAAGTAATGGTAAACAAAACTGAGAACCTCTTGGGGTGTTGGCAAGCAAGCAATGGGAACTTATCAGAGGCCTTTTATCAGAAATATCTCCAAGATTCTTCCAAAATGTACTCAGAACAGTTTAACATTGCGGGTTCAGATGACATGGATGAGCTTGATGCTGCAACCAGTGATTCCTCCGAACCTGACTTGCTTTGGCAATTTAATCATTCCAAACTCACCAATGGAATGGGATCAAAGACTATGAGACCTGTCTCAAAGGCAGCAAAAAGCCCAGATTTGAGGAGGAATGCTGTTCATTCTCCTCTTGGTCCTTCACCTTCGTTGAAACAACAATCAAATGGTGTCTCACATCGAACAGGAAGGCATCCAGCTTCGGTTGATGTGAAACGTAAAACTGGGAGCAGAAAATAA 3021 0.4191 MAAEAALSFSVASVVEDVLQQHGPRLKDLDLQSRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPVDSALIPDGAPLSAYQYFENVRNFLVAVQEIGLPTFEASDLEQGGKSSRIVNCVLALKSYSEWKQNGANGAWKFGGTLKPTISAKSFVRKNSEPFTNSLSRTSSINEKSLATLNSDVESNKMPGSHSLSMLIHSILSDKKPEEIPMLVESVLNKVVEEFEHRIASQGEQTKITSRDSVPESNGSVTKFVRADKKVDNKTHMVTKKEDCIQKNRVAAEELQSHLLKQQTLFDQQQRDVQGLKLTLHTTKSGMQLMQKKFQEEFSNLGMHIHGLAHAASGYHRVLEENRKLYNEVQDLKGSIRVYCRVRPFFPGQANQLSTVENIEDGTITIDVPSKNGKGRRSFNFNKVFGPSATQAEVFFDMQPLIRSVLDGYNVCIFAYGQTGSGKTHTMTGPKEITEKSQGVNYRALGDLFLIADQRKDTFHYDVSVQMIEIYNEQVRDLLVTDGCLSLTIDTLEIRSSSHKGLSVPDASLVPVSSTLDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLALKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPETDAIGETISTLKFAERVATVELGAARVNKDSADVKELKEQIANLKAALARKEGESEHSLSSSSDKYRTKASNLSPYHINQQVADTRDPLGCRRPMVEVGNIDVCIFHFLMQLQSNTTLRHKTQSFDFDEISANSPPWPPVNNVGQNYGEDEKETGCGEWVDKVMVNKTENLLGCWQASNGNLSEAFYQKYLQDSSKMYSEQFNIAGSDDMDELDAATSDSSEPDLLWQFNHSKLTNGMGSKTMRPVSKAAKSPDLRRNAVHSPLGPSPSLKQQSNGVSHRTGRHPASVDVKRKTGSRK. 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05082 1006 Pfam Kinesin motor domain 405 727 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05082 1006 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 803 IPR027640 GO:0003777|GO:0007018
Seca2g05082 1006 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Seca2g05082 1006 FunFam Kinesin-like protein KIN-14I isoform A 394 770 - -
Seca2g05082 1006 CDD KISc_C_terminal 397 730 - -
Seca2g05082 1006 Coils Coil 735 762 - -
Seca2g05082 1006 SMART kinesin_4 397 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05082 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 761 IPR027417 -
Seca2g05082 1006 SMART ch_5 42 160 IPR001715 GO:0005515
Seca2g05082 1006 MobiDBLite consensus disorder prediction 973 989 - -
Seca2g05082 1006 PRINTS Kinesin heavy chain signature 678 699 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05082 1006 PRINTS Kinesin heavy chain signature 598 615 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05082 1006 PRINTS Kinesin heavy chain signature 629 647 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05082 1006 PRINTS Kinesin heavy chain signature 472 493 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05082 1006 ProSiteProfiles Kinesin motor domain profile. 399 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05082 1006 CDD CH_AtKIN14-like 42 159 - -
Seca2g05082 1006 MobiDBLite consensus disorder prediction 942 1006 - -
Seca2g05082 1006 Gene3D Kinesin motor domain 394 770 IPR036961 -
Seca2g05082 1006 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Seca2g05082 1006 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Seca2g05082 1006 SUPERFAMILY Calponin-homology domain, CH-domain 38 172 IPR036872 -
Seca2g05082 1006 MobiDBLite consensus disorder prediction 992 1006 - -
Seca2g05082 1006 Gene3D - 27 186 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05082 Seca-Chr2 137311239 137318001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05082 387 775 Calmodulin-binding Proteins AT5G65930 40.609 1.29e-77 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05082 K10406 - gmx:100795476 1642.48