Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05081 ATGTCCGGCGTCGTTGATTCTAACGGTGCCGTTTGTTATTATTCAGTGCTTGGTATTTGCAAACATTCCACCGATGACGAAATCCGTTGCGCTTATCGTAAGATGGCTCTGTGGCATCCTGACCGGTGGATCAAGGACCCAAAGCTTGCACTAGAAGCCAAAAAGCGGTTTCAGCATATTCAAGAGGCTTATTCAGTTTTGTCCAATAAAGGGAAGAGAAGGATTTATGATGCTGGCTTGTTTGGTCTCATTGGAGAGGACGATGATGAGGTGGGTTCATATCCATACTTAATTAATTTATCCTTTTTCCTTTAA 315 0.4286 MSGVVDSNGAVCYYSVLGICKHSTDDEIRCAYRKMALWHPDRWIKDPKLALEAKKRFQHIQEAYSVLSNKGKRRIYDAGLFGLIGEDDDEVGSYPYLINLSFFL. 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05081 104 Pfam DnaJ domain 13 77 IPR001623 -
Seca2g05081 104 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Seca2g05081 104 PRINTS DnaJ domain signature 14 32 IPR001623 -
Seca2g05081 104 PRINTS DnaJ domain signature 52 72 IPR001623 -
Seca2g05081 104 CDD DnaJ 12 69 IPR001623 -
Seca2g05081 104 Gene3D DnaJ domain 5 90 IPR036869 -
Seca2g05081 104 SUPERFAMILY Chaperone J-domain 9 81 IPR036869 -
Seca2g05081 104 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
Seca2g05081 104 PANTHER PUTATIVE, EXPRESSED-RELATED 9 91 - -
Seca2g05081 104 SMART dnaj_3 11 72 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05081 Seca-Chr2 137308933 137310037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05081 12 78 C2H2 Transcription Factor Family AT1G74250 47.826 3.20e-13 62.4