Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05069 ATGAAGCTTGAAAAATCTTTAGTTGATATTGATGAGCGAATTCCAAAGGTTGGTATGATATTGGAGTCTGAAGAGGAGCTTCATGTTTTTTATAAGAAATATGCCTATGAAGTTGTATTTGGGGTTCAAAAAATTAGCACAAGAACGGATGGTAAAGTCAAATATTATTCTCTTGGATGTTCCAAAGGAGGTAAATATGTAAGTAGAGCAAGTTCTTCTAAGTTTAGATTGTCTAGCAAAACTGAATGTCAAGCAAAAATTTCTGTGATTGTTCATAGCAGTGGAAATTGTACTATTTCTCGTGTTAATCTAGAGCACAATCATGCTTTAAGTCCAAAAAAATCAAGATTTCAAAGGTCCCATAAGAAAATGGATTGTTATTCAAAAAGGAGGCTTGAGTTAAATGATTGTGCAGGAATTCCAATGAACAAAAATTTTCATTCATTGGTAGTTGAAGCTAAAGGGTATGAGAACTTGCAATTTGGTGAGAAAGATTGTAGGAATTACATAGCAAAGGTGAGGCAACTGAGGCTTGGAGTTGGGGATGCTGAAGCACTTCGTGACTACTTCATTCGTATGCAACGAAGAAATGCAAATTTTTTTTATGTCATTGATATGGATGATGAAGGTCATGTACGAAATGTTTTTTGGGCAGATGCAAGGTCCAGGGCAGCTTATGACTCATTTGGAGATGTTGTGTCATTTGATAGTACATATTTGACCAATAGATACAATATGCCAATTTCTCCTTTTGTTGGAGTGAACCACCATGGGCAATCCATCTTATTTGGATGTGGTTTACTATCAAGAGAAGACATAGATACATATGTATGGTTGTTCAAGTCATGGCTGGAATGCATGCTTGGGCGAGCTCCAAAAGCAATAATTACAGATCAATGTCGATCTATCCAAGCAGCAATAGCAAATGTATTTCCTAAATCTCACCATCGCTTTTGCCTTTGGCATATTATGAAAAAGGTCCCTGAGAAATTAAGTGGGTTAGCTAGATACAAAGAAATAAAGAAAACCTTGAAAACTATTGTGTATGATTCAATGTGTCCAAGTGACTTTGTTGATGATTGGCATAAAATGATAGATGATTACAGTCTTCAAAAAAATGAATGGTTAAGCTCTTTATTTTCTGATCGTAGTCGTTGGGTGCCAACATATGTTAAGTCAATATTTTGA 1188 0.3535 MKLEKSLVDIDERIPKVGMILESEEELHVFYKKYAYEVVFGVQKISTRTDGKVKYYSLGCSKGGKYVSRASSSKFRLSSKTECQAKISVIVHSSGNCTISRVNLEHNHALSPKKSRFQRSHKKMDCYSKRRLELNDCAGIPMNKNFHSLVVEAKGYENLQFGEKDCRNYIAKVRQLRLGVGDAEALRDYFIRMQRRNANFFYVIDMDDEGHVRNVFWADARSRAAYDSFGDVVSFDSTYLTNRYNMPISPFVGVNHHGQSILFGCGLLSREDIDTYVWLFKSWLECMLGRAPKAIITDQCRSIQAAIANVFPKSHHRFCLWHIMKKVPEKLSGLARYKEIKKTLKTIVYDSMCPSDFVDDWHKMIDDYSLQKNEWLSSLFSDRSRWVPTYVKSIF. 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05069 395 PANTHER OS01G0519700 PROTEIN 9 384 - -
Seca2g05069 395 Pfam MULE transposase domain 232 326 IPR018289 -
Seca2g05069 395 Pfam FAR1 DNA-binding domain 30 111 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05069 Seca-Chr2 137186944 137188131 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g05069 MULE 8.3e-33 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05069 - - lsv:111921116 586.26