Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05060 ATGTCTACTACCCTTAGCTTTAACAATAGAAATTTACATGGTGATACAAACGCACAACCCAAAAGAAATGAGGCTCAAACAGCAACAGAGAATAGGCAGTATCCAAGGTCAAGTACAATGCAATCTAAACCAGATACGCTCTCTTCTGAGCCCAAACAAGCCCATCTTCTAAGCCTAGATCGGTGGGAACCAATTATGAAGAAAAACGACTCAAAAACCCTAGTTTGGTTTCAGGATGAGAACTATCTTAAATTGCAGGGGATCGATCTCAAGGCCGGAGGTAAGAGCAAAAAGACCAAAAGAACCGCACCCAAGTCCAATGATATCTATCTCAAGCTCTTGGTCAATGTGCAGCAGTCGCAGTGTGCTTTGCTCGTCCGAGACACGAAACAACAATGGTTCGTCCTCTCTCTCAGCATTCCGTTTCAGTGTGAGGCTTCTTCTTTTTCTGACTATGTTTCATTTCGTTTGGAATTGCAGGGGATCGATCTCAAGGTAGGAGGTAAGAGCAAAAAGACCAAAAGAATCGCACCCAAGTCCAATGATATCTATCTCAAGATCTTGGTCAATGTCCGTTTCTCATTACTTCCCTTATGCTTATCAAGAGTAAAAATCTCCATACTAAGAATCATTGTCAAAATATAA 645 0.4155 MSTTLSFNNRNLHGDTNAQPKRNEAQTATENRQYPRSSTMQSKPDTLSSEPKQAHLLSLDRWEPIMKKNDSKTLVWFQDENYLKLQGIDLKAGGKSKKTKRTAPKSNDIYLKLLVNVQQSQCALLVRDTKQQWFVLSLSIPFQCEASSFSDYVSFRLELQGIDLKVGGKSKKTKRIAPKSNDIYLKILVNVRFSLLPLCLSRVKISILRIIVKI. 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05060 214 Gene3D - 86 134 - -
Seca2g05060 214 PANTHER 60S RIBOSOMAL PROTEIN L18 87 132 IPR000039 GO:0003735|GO:0005840|GO:0006412
Seca2g05060 214 MobiDBLite consensus disorder prediction 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05060 Seca-Chr2 137124867 137129582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05060 162 209 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 52.083 1.16e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05060 K02883 - gmx:100813255 61.2326