Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05045 ATGATCATTATGGCACGCCTTATGTTACTGCTAGCATTGTTTCTTTCATTTAGTAGCCGAATGGTATTTGCAAAAGGGAAAGATAATGTTAGAGAAGCTTGCAGTGTAACAAGGTACCAAGACCTTTGTGTCCACTCACTAGCACGATTCTCTAACACTGCAGGAAGAAGCCCCAGCAAGTGGGCACGTGCAGGAGTGTCAGTAACAATAAGCGAGGTTAAGAATGTTCAAGCTTATCTCACAAAATTGAAGAGGAATGGGCGAATGAAAGGAAGAAACAGAGTGGCACTTTCAGATTGTGTTGAGACTTTTGGTGATGCACTTGATGAGCTTCACAGATCACTTGGTGTGCTTAGGAGGTTAAGCAAAAGCACGTTTAGTACCCAAATGGGGGACCTCAACACATGGATTAGTGCAGCACTTACTGATGAAGACACTTGTCTCGATGGGTTTGGTGACAAAACTGGGAGGCAAATCAAATTGCTGCAAAAACGGGTTCAGAATGTGTCTTACATAACAAGTAACGCTCTTGCTCTTGTTAACAAACTTGCCACTACAGGTCTGGGAAGCATCACTGATCCATAG 585 0.4325 MIIMARLMLLLALFLSFSSRMVFAKGKDNVREACSVTRYQDLCVHSLARFSNTAGRSPSKWARAGVSVTISEVKNVQAYLTKLKRNGRMKGRNRVALSDCVETFGDALDELHRSLGVLRRLSKSTFSTQMGDLNTWISAALTDEDTCLDGFGDKTGRQIKLLQKRVQNVSYITSNALALVNKLATTGLGSITDP. 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05045 194 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 179 - -
Seca2g05045 194 NCBIfam pectinesterase inhibitor domain 8 183 IPR006501 GO:0004857
Seca2g05045 194 CDD PMEI-like_3 33 185 - -
Seca2g05045 194 SMART PMEI_2 25 179 IPR006501 GO:0004857
Seca2g05045 194 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 185 IPR035513 -
Seca2g05045 194 Pfam Plant invertase/pectin methylesterase inhibitor 29 179 IPR006501 GO:0004857
Seca2g05045 194 FunFam Pectinesterase inhibitor 3 25 184 - -
Seca2g05045 194 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 183 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05045 Seca-Chr2 137027180 137027764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05045 30 191 Carbohydrate Esterase AT3G14310 35.928 7.97e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05045 - - adu:107492431 271.552