Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05015 ATGGATGTCTGGAACGATGATTTTACGGAGCTGGAGACTGGGAGTTCGGTTGAGTCGTTTCAGAGGTTTTTGGTTTCGCAAAAAGAGCTCTTCCATAGTCAGATCGATCAGTTTCAAGAGATTGTCGTCACGCAATGCAAACTCACTGGCGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGTGCTCTATCAATAAAAATTGGTAAAAGACCTAGGGATTTATTAAATCCAAAGGCTGTAAATTACATGCAATCTGTTTTTTCCATTAAAGATGCAGTTAGCAAGAAAGAATCTCGTGAGATCAGTGCTTTATTTGGTGTTACAGTGACGCAGGTGCGTGACTTTTTCACGAGTCAACGTTCAAGAGTAAGGAGGCTAGTTCAGTTGTCAAGGGAGAGGGCATTAAGATCTAATTCTTGTGAAGAATCTAATGATGGGCAAATAAACTCTGATCCTTTGAGACCAATAAATCTGGCTCCCTTAAACTCTGCTGGCCCCACCAATTCTGAAGAAGCATCTTGTTCAACACAGGAAGCAGCTTTGTCTGACCTAGATGATTTAGATAAACAATTTGTTGAGAACATTTTTAGTCTAATGCAGAAAGAGGAAACATTTTCTGGGCAGGAGAGATTGATGGAGTGGATATTGTCGATACAGAATTTTTCAGTGTTGTTGTGGTTTCTAACCAGAGGTGGTGCAATGACTTTAGTAACGTGGTTGAGTATAGCAGCTGTTGAAGAGCAAACAAGTGTCCTTCTTCTTATCTTGAAGGTTCTTTGTCATTTGCCTTTACATAAAGCCCTTCCTACTCACATATCAGCTATATTGCAGAGTGTTAATAGACTAAGGTTCTACAGGACATCAGACATATCAAACAGGGCAAGGATTTTGTTATCGAAGTGGAGCAAACTATTAGCAAGGAACCAAGCAATAAAGAAACCTAATGGTGTTAAACCTTCTGGTGATAGTAAAAAAGACATAATGCTTTCTCAGAGTATTGGTCAAATTATGGGCTCTGGATCATGGCATTCAAATATTGATGTTCCTGAAGATATTCTTGCTCTCTCAAATGAAAGTTCAGATAATTTCAGGTATGTGAAACTGGAATCTCCTGTGAAATTGTTACAACCCAGCTCAGATGATTCTAATAAGAAACCCACCCTTGGTGTATCTTCATCTCAAGCTAGGGAGCGCAGGAAAGTGCAATTGGTGGAACAGCCAGGCCAAAAATCAGTTAGTAGAAGCCCACAGGTGGCAAGAGCAGGCTCTGTAAGTCAAGGTCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCGTTATTTATGCAGAGTAAGTATGGGAAAACTGGTTCTTCAAAAGAAAGTAAAGAAGCAAAAATTGATGGTCTCAATAAACCTCAGACAAATCAGGCCAGTATTGCAGTTTGCTCTTCTAAAGTTCCTGTTCCACCTAAAATTGAAGAAGACAAGAAACCTCTGTTGCTTCCCTCTAAAACCACTAATAGGCTGGACGCATCTTATTCTAAACCGAAAATGGATTTGAAGGAACCTCTCTGGGAGAAGTGCAAGAGGGTGCAAATCCCATGGAAAACACCAGCAGAAGTGAAACTTAAAGATTCCTGGAGAGTTGGTGTTGGTGCAAATAGCAAAGAGGTTGATGCCCAGGAAAACAGAAACCGCAGGGACAAGGAATCTATTTATCATAGTGTCCAAGAGATGCCATCTAACCCCAAGGAGCCGTGGGATCTCGAAATGGACTATGATGACACTTTGACACCGGAGATTCCTATTGAACAGCTACCAGATGGTGATGGTGCAGAAATAGCAGTTGCCCCCAATCAGGTTGCAGCTCATGCTATTCATGGGGTGGCCTCCACATCTTCAACCGTTAATGCAGCAACTGCTGAACCTGATTTAGAATTACTTGCCGTACTGCTGAAAAATCCAGAATTGGTATTTGCCTTAACTTCTGGACAAGCTGGTAGCATACCAAATCAGGAAACCGTGAAGCTGCTTGACATGATCAAGAAAGGCACTGTGAACTCGGGTTTAAGTGAAAATACAAATGGCAATTATGGCATGAGTGCAAAGGCCCCAGAGAAGGTTGAAGTTTCTCTCCCATCTCCAACCCCTTCAAGCGATCCAAGAACGAGTGGATGGAGCACAGAAGCACCAAAGAATCCTTTTTCACGGCGAAGTTCAGCACCTGATAGAGCTATCCACAACTCTGCTGCAGTGGTAACTACCAACTTAGTATCTCAGATTCCTATAACTGGCACTTCAGTAAGGCAACAGCCAACAGTTGTGGCTTCATCTTCGAAGCAGCTAACCAGCAGAGCAGTTTCTCCATATTCACTGCCTCATGCAACTAATATTATTCCTGAAAAGCAATCATCACTAGCTCTTTCCTCTTTGCATGCACAAACACCATCCTCTGATATAGGTTTAACCATGAAGAAGAACATAATCACTGCAAATGGACCTTCAGTTAACTTACCTGGCGCACATTCATCTCTAGCAATGCGGGCTGATGGCACGAGTAATGTAAAACCAGTACCTAATTTGAGTTTACAAGAGGGTTTGTCTAATTCATACCCTCAATCCTTCATGTTGGCCTCACCAACGCCATCACATTCAGCAACACAACAACAAAGACATCCACATTTGCTTCATCAGGCCCATTATACTGAACCTTCATATCGTAACACTGTCCATTCCTATCCACCACAAATCGAAAAATCAGGACCCGTGTCAGATTTGTGGAGAGTTAGGCAGGATGTGTCTTCCAGTTATCATTCTCAACGAAATCATAGCAACTATAATACGTATGGTGGTGGGGGATCCATGCAATCTGGTTCATGGGATAGAAATAATCAAGGAAGGGAAGAATTTGAATCATGGAGTCCAGAGAATAGTCCAACTAGAAATCCTAGGTATGTTCCAGGTAGAAATGTTCAAGAGTCAAGAATGAATCATGTTAGAAATCATAGACCTGAATGGTCAAGGCAGCGGGGTTCTTCTGGACACTGGGACCCTGGTAGTGGTAGGCATGGGAACAAAAGGTGGCATGATCAGAGACGTTGA 3093 0.4229 MDVWNDDFTELETGSSVESFQRFLVSQKELFHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSVFSIKDAVSKKESREISALFGVTVTQVRDFFTSQRSRVRRLVQLSRERALRSNSCEESNDGQINSDPLRPINLAPLNSAGPTNSEEASCSTQEAALSDLDDLDKQFVENIFSLMQKEETFSGQERLMEWILSIQNFSVLLWFLTRGGAMTLVTWLSIAAVEEQTSVLLLILKVLCHLPLHKALPTHISAILQSVNRLRFYRTSDISNRARILLSKWSKLLARNQAIKKPNGVKPSGDSKKDIMLSQSIGQIMGSGSWHSNIDVPEDILALSNESSDNFRYVKLESPVKLLQPSSDDSNKKPTLGVSSSQARERRKVQLVEQPGQKSVSRSPQVARAGSVSQGRPMSADDIQKAKMRALFMQSKYGKTGSSKESKEAKIDGLNKPQTNQASIAVCSSKVPVPPKIEEDKKPLLLPSKTTNRLDASYSKPKMDLKEPLWEKCKRVQIPWKTPAEVKLKDSWRVGVGANSKEVDAQENRNRRDKESIYHSVQEMPSNPKEPWDLEMDYDDTLTPEIPIEQLPDGDGAEIAVAPNQVAAHAIHGVASTSSTVNAATAEPDLELLAVLLKNPELVFALTSGQAGSIPNQETVKLLDMIKKGTVNSGLSENTNGNYGMSAKAPEKVEVSLPSPTPSSDPRTSGWSTEAPKNPFSRRSSAPDRAIHNSAAVVTTNLVSQIPITGTSVRQQPTVVASSSKQLTSRAVSPYSLPHATNIIPEKQSSLALSSLHAQTPSSDIGLTMKKNIITANGPSVNLPGAHSSLAMRADGTSNVKPVPNLSLQEGLSNSYPQSFMLASPTPSHSATQQQRHPHLLHQAHYTEPSYRNTVHSYPPQIEKSGPVSDLWRVRQDVSSSYHSQRNHSNYNTYGGGGSMQSGSWDRNNQGREEFESWSPENSPTRNPRYVPGRNVQESRMNHVRNHRPEWSRQRGSSGHWDPGSGRHGNKRWHDQRR. 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05015 1030 MobiDBLite consensus disorder prediction 406 424 - -
Seca2g05015 1030 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Seca2g05015 1030 MobiDBLite consensus disorder prediction 554 584 - -
Seca2g05015 1030 MobiDBLite consensus disorder prediction 992 1007 - -
Seca2g05015 1030 MobiDBLite consensus disorder prediction 931 960 - -
Seca2g05015 1030 MobiDBLite consensus disorder prediction 967 984 - -
Seca2g05015 1030 SUPERFAMILY Homeodomain-like 68 130 IPR009057 -
Seca2g05015 1030 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 1013 - -
Seca2g05015 1030 MobiDBLite consensus disorder prediction 931 1030 - -
Seca2g05015 1030 Gene3D - 68 125 - -
Seca2g05015 1030 MobiDBLite consensus disorder prediction 709 732 - -
Seca2g05015 1030 SMART HOX_1 68 130 IPR001356 GO:0003677
Seca2g05015 1030 MobiDBLite consensus disorder prediction 683 739 - -
Seca2g05015 1030 MobiDBLite consensus disorder prediction 375 432 - -
Seca2g05015 1030 MobiDBLite consensus disorder prediction 683 697 - -
Seca2g05015 1030 MobiDBLite consensus disorder prediction 556 571 - -
Seca2g05015 1030 MobiDBLite consensus disorder prediction 375 397 - -
Seca2g05015 1030 MobiDBLite consensus disorder prediction 903 922 - -
Seca2g05015 1030 MobiDBLite consensus disorder prediction 448 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05015 Seca-Chr2 136795929 136805077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05015 481 735 Homeobox Transcription Factor Family AT4G02560 47.860 4.85e-51 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05015 - - gmx:100806633 1572.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05015 2 136795929 136805077 Seca2g05015 2 136795929 136805077 ECH