Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05013 ATGGAATTTGATTCACTAGAAAAAGTTGTGGAGTTTTATAAATTATTTGCTAAGGCAAAAGGGTTTGGCATTCGTACCCGCTCAAGTAAAGAGAATTATTGCATTTTGGTATGTGTTAGGGAAGGTGAAAATCAGGTGAAAAGTGGTCAAGGTGAAAAAGATAAAGGCAACATAAGAGAAATTAAGAGAAAATGTTCAACCATACGAATGGGATGTCAAGCAGCACTTATTGTATCAAAGGACAAGAATCGGGGCATATGGGTTATAAAATCTTTTGACAATAACCATAATCATGTCATGGCTAGTCCTAAGAGTGTGTCTTATTTGAGGTGTCATAAAAAAATGGGTGTTGCTGCAAAAAAACTTGTTGAGAGGTTTAATGAAGAAGGTTTACCTACTGGAAAGGTTGCTACAATGTTTAATGGCAGTGGTTTGACTTTTTCTAATAGAGATTGTTGGAATCATATGAGAGATGTTCGAAATGATTGGAAACGTATAATGGAAGCATACAAGTTGGAAGAAAATGAGTGGCTTAAAGGGTTATTTGAAATTAGAGAGTCATGGATACCGATTTATAATAGAAGCACTTTTTTTGCTGGTATGAATACTACACAAAGAAGTGAGAGTATCAATTCTTTCTTTGACTCATTTGTTGATGCATCCACAACATTACGAGACTTTGTGGTGAAATTCAAGAAGGCTTTGTGTAATCGTTATGAGGATGAAAAAAGAGAGGATTTTGAGCCTAGACATAAATCCCGCATTTTGAGCATCGGCTCAAAAATTGAGGAGTATGTTGCGTCAATCTATACTATAAATGTGTTTGGGAAGTTCCATAATGAGCTTGCAAGCGTCAGCCATTTTACAAAGGAGAAGATTGAGAAACATGGTTCACAATGTAAGTATCGAGTATTTAATTGTTTTAATGCTCGAGATACGCATATTCTGGTGATTTTTCAAGCAAAAAATGTCATTCAAATTCTCAGTCAATATGTTTTGCAATGCTGGACAAAAGAAGCAAATATATGTATTGAGGTTAGTGATGTTGATAGTCAGAAGCATGATTCAGATGTGTTAAGAAGTATGCATCTACAACGTCAATTTGACAAATTTTTTGATTTGGCTGAAAAATCAGATGATGCTTACAAGTTTATCATGGCATAA 1164 0.3471 MEFDSLEKVVEFYKLFAKAKGFGIRTRSSKENYCILVCVREGENQVKSGQGEKDKGNIREIKRKCSTIRMGCQAALIVSKDKNRGIWVIKSFDNNHNHVMASPKSVSYLRCHKKMGVAAKKLVERFNEEGLPTGKVATMFNGSGLTFSNRDCWNHMRDVRNDWKRIMEAYKLEENEWLKGLFEIRESWIPIYNRSTFFAGMNTTQRSESINSFFDSFVDASTTLRDFVVKFKKALCNRYEDEKREDFEPRHKSRILSIGSKIEEYVASIYTINVFGKFHNELASVSHFTKEKIEKHGSQCKYRVFNCFNARDTHILVIFQAKNVIQILSQYVLQCWTKEANICIEVSDVDSQKHDSDVLRSMHLQRQFDKFFDLAEKSDDAYKFIMA. 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05013 387 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 118 IPR031052 GO:0006355
Seca2g05013 387 Pfam FAR1 DNA-binding domain 11 100 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05013 Seca-Chr2 136771632 136773165 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g05013 FAR1 1.4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05013 - - lang:109344589 282.337