Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04975 ATGAAGATGAGATTTTTGCTTGTTGCTTGTTTGGTAGTGTTTTGTTTCCTTGAGGTTTGTCAAGGTGGCAGCCTCAGAAAGAATTTCTATAGGAAATCCTGTCCTCAAGCGGAGCAGATTGTTCAGACCAAAATCAACCAGCATGTCTCTGCAAGGCCCGATTTGCCAGCCAAGCTGATTAGAATGCATTTTCATGACTGTTTTGTCAGGGGGTGTGATGGGTCGGTTTTGTTGGAGTCCACTGCCAATAACACTGCAGAGAAGGATGCCATTCCTAATTTATCTTTGTCTGGCTTTGATGTTATAGAAGACATAAAAGAAGCACTGGAGGCTAAATGTCCCAGAATTGTATCTTGTGCTGATATACTAACTTTGGCAGCTAGGGACTCTGTTTCTGTCCAAATATTTGAACAGTTTAATAAGCCTATGTGGGAAGTGCTTACCGGTAGAAGAGATGGCACAGCATCTAAAAGTAGTGAAGTTTTGGCCAATATCCCAGCACCTTTCTTTAACTTTGCCCAGCTCAAACAAAGTTTTGCTAATAAAGGGCTTACTTTGCACGACCTTGTTGTATTATCAGGAGCACACACAATTGGAATAGGGCATTGCAATTTGTTCAGTAACAGGCTTTTCAACTTCAGTGGAAAAGGTGATCAAGATCCTTCTTTGAATCCCAGTTATGCCAATTTCTTAAAGAGTAAATGCAAGAGCCTGAGTGACACCACCACAACAGTAGAGATGGATCCTAATAGCTCTGAAAGCTTTGACAGTGACTATTATTCAATCCTTCTCCAGAACAAGGGTTTGTTCCAATCAGATGCTGCCCTTCTAACAACCAAGCAATCTAAGAACATTGTTAACGAATTGGTTAGACAAAACAAATTCTTCACAGAATTTGCACAGTCAATGAAGAGGATGGGAGCCATTGAGGTCCTCTCAGGCTCTGCTGGGGAAATTAGGAGGAAGTGCTCTGTTGTCAACTCTTAA 987 0.4154 MKMRFLLVACLVVFCFLEVCQGGSLRKNFYRKSCPQAEQIVQTKINQHVSARPDLPAKLIRMHFHDCFVRGCDGSVLLESTANNTAEKDAIPNLSLSGFDVIEDIKEALEAKCPRIVSCADILTLAARDSVSVQIFEQFNKPMWEVLTGRRDGTASKSSEVLANIPAPFFNFAQLKQSFANKGLTLHDLVVLSGAHTIGIGHCNLFSNRLFNFSGKGDQDPSLNPSYANFLKSKCKSLSDTTTTVEMDPNSSESFDSDYYSILLQNKGLFQSDAALLTTKQSKNIVNELVRQNKFFTEFAQSMKRMGAIEVLSGSAGEIRRKCSVVNS. 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04975 328 Pfam Peroxidase 42 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 PANTHER PEROXIDASE 25-RELATED 12 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 Gene3D - 28 327 - -
Seca2g04975 328 Gene3D Peroxidase, domain 2 166 306 - -
Seca2g04975 328 SUPERFAMILY Heme-dependent peroxidases 25 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 FunFam Peroxidase 28 169 - -
Seca2g04975 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Seca2g04975 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 FunFam Peroxidase 166 306 - -
Seca2g04975 328 ProSiteProfiles Plant heme peroxidase family profile. 24 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g04975 328 CDD secretory_peroxidase 25 326 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04975 Seca-Chr2 136374348 136376729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04975 3 328 Peroxidase AT1G05260 54.518 1.21e-121 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04975 K00430 - gmx:100775970 563.148