Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04895 ATGTATGAGAAACAACCCCAGTTAAACGGAGCCTACTACGGCCCCGCCATCCCGCCACCTAAAACCTACCACCGCCCAGGGCGTGGCAGCGGGTGCTGCTGTGGTTGCCTCTTCAGCCTCATCTTCAAACTCATCCTCACCGTCGTCATCATCGTGGGCATCGCTGTGTTCCTCTTCTGGCTCATCGTCCGCCCCAACGTCGTCAAGGTTCACGTAACCGATGCTTCCCTCACCCAATTCAACTACGCCAACAACACCCTCCAATACAACCTTGCTCTCAACTTCACCGTTCGCAACCCCAACAAGAGGCTCGGCATCTACTACGACTACATCGAAGCCAGGGCATTGTACCAGGACGCTAGGTTCGACTCCGAATTCTTGGACCCTTTCTATCAGGGCCACAAGAACACCACCTTTTTGAGCACTGAGTTCAAGGGTCAACACGTGATGACGCTTGACGCTGACCAGTCTTCCGAACTGAGCAAGGAGAAGGGCTCTGGGGTTTACGGGATCGATGTGAAGCTTTATCTGAGGGTGAGGTTCAAGTTGGGAGCGCTCAAGACGAAGACGCTGAAGCCAAAGGTTAGCTGTGAGTTGCACGTTCCTTTGACTTCAGCCACGAGTGGCTTTCAGACCACCAAGTGCGACTGGGATCGCTGA 660 0.5424 MYEKQPQLNGAYYGPAIPPPKTYHRPGRGSGCCCGCLFSLIFKLILTVVIIVGIAVFLFWLIVRPNVVKVHVTDASLTQFNYANNTLQYNLALNFTVRNPNKRLGIYYDYIEARALYQDARFDSEFLDPFYQGHKNTTFLSTEFKGQHVMTLDADQSSELSKEKGSGVYGIDVKLYLRVRFKLGALKTKTLKPKVSCELHVPLTSATSGFQTTKCDWDR. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04895 219 PANTHER OS05G0367900 PROTEIN 30 203 IPR044839 GO:0098542
Seca2g04895 219 Pfam Late embryogenesis abundant protein 95 197 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04895 Seca-Chr2 135431278 135431937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04895 62 209 SNARE and Associated Proteins AT1G32270 39.597 2.73e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04895 - - gmx:100806641 325.094