Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04885 ATGTCTACCTCCAGAAAGAAGCTTCTTTTAAACACAGTATCTGTGAAACTTGGCTGTGGCAGCTGCAGAAGACCAAAGCTATGTCGCATATTCCACCCAAAGCCAAAACCCAAGAACCCCACTTACCAAAAACACAAACTTTACAACCATTCCTCTTCAGGCACTTGGGGTGAGGACAAATATGACAGCACCAGCACCACCACAAACACCACCCCCACCAACACTGCAACCACATTCTCTCCTTGCTATGTTGATTCCTCACACTTTTCTGATTCAGAGACCTACATGAAGGCCCCAAAGACAGTAGGGGGTTTCGGCAGAGCTGGCAGAGAAGGAGTGGCAGTAGAAAAAGATTCTGATGACCCTTATCTTGATTTCAGGCATTCCATGCTTCAAATGATATTGGAGAATGAGATATACTCAAAGGACGATCTGAGGGAGCTTCTGAATTGCTTTCTTCAGCTGAATTCACCTTATCATCATGGGGTTATAGTCAGAGCTTTCACTGAGATCTGGAATGGGGTCTTCTCTGTGAGGTCCAATTCACCAAAGCTTCAAATCCCCCGCAAGCCTCGTGAGTTCTAA 585 0.4564 MSTSRKKLLLNTVSVKLGCGSCRRPKLCRIFHPKPKPKNPTYQKHKLYNHSSSGTWGEDKYDSTSTTTNTTPTNTATTFSPCYVDSSHFSDSETYMKAPKTVGGFGRAGREGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPYHHGVIVRAFTEIWNGVFSVRSNSPKLQIPRKPREF. 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04885 194 NCBIfam uncharacterized plant-specific domain TIGR01568 113 173 IPR006458 -
Seca2g04885 194 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 53 177 IPR038933 GO:0045892
Seca2g04885 194 ProSiteProfiles OVATE domain profile. 115 174 IPR006458 -
Seca2g04885 194 Pfam Transcriptional repressor, ovate 119 175 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04885 Seca-Chr2 135315907 135316491 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca2g04885 Ovate 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04885 - - gmx:106797222 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04885 2 135315907 135316491 Seca2g04885 2 135315907 135316491 ECH