Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04884 ATGAGCAAGAAAATGAAGCTCCCTTCTCTTCTCAAGATCACCACAGAAGCCAAGTCTTCCTCTTCCCCATGGCCCTGGCCATCTTGTCACCAACCCAAAACACACTCTTTCAGAGCCACAAACAACAACAACACATTCAAAACCATTAACTCAGCCTCCTACTTAGATACCACCACCATGGACATGCTTGAAAGCTCTGAACCATTCTTCACCGTTTCTCCCCACTCTGCTAGCTTCTCATCTGCTTCAGAACAACAATCCAATAAAAGAGCCGATTCAATCGAAACCGTCATTCGTGGGTTGCGTTCTGACCGTTTGTTCTTCGAGCCAGATGAAACCAGTTCCATATTAGAAGCTAAAGCTGGAAGCTTGCCATTCAAAGACAGCGTGGTGTTGTCTTTGGAATCTCAAGACCCTTTCCTTGATTTTCGAAGATCCATGGAGGAGATGGTAACAGCTCACGGTGTGAAAGATTGGGAGAGTCTTCAAGAGCTTATGTGTTGGTATTTAAGGGTCAATGAAAAATCCAATCATGGATATATTGTTGGTGCTTTTGTTGATTTATTGGTTGGTCTTGCATTTGCTGGTTCTGCTTCATCAACAACAACAACAACTTCTTCTTCTTCTACTTCCCATTCTCCTTCTTCTCCTTTATCGTTTTATAGTTCTTCTCTTTCTTCTTCTTATTGCAGCACTCGTTGTGTTTCTTGTTTGGAAGCTGAGGTTCATGATGATGATGTTAGTACTCCTAGTTCATCTTTGTTGTTAGAACAAGTTAGGGAGGAGATTAATCATGAAGAAGATGTGGCTTCATCTTCATCTTCATCAAATATTTGA 837 0.4158 MSKKMKLPSLLKITTEAKSSSSPWPWPSCHQPKTHSFRATNNNNTFKTINSASYLDTTTMDMLESSEPFFTVSPHSASFSSASEQQSNKRADSIETVIRGLRSDRLFFEPDETSSILEAKAGSLPFKDSVVLSLESQDPFLDFRRSMEEMVTAHGVKDWESLQELMCWYLRVNEKSNHGYIVGAFVDLLVGLAFAGSASSTTTTTSSSSTSHSPSSPLSFYSSSLSSSYCSTRCVSCLEAEVHDDDVSTPSSSLLLEQVREEINHEEDVASSSSSSNI. 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04884 278 Pfam Transcriptional repressor, ovate 136 192 IPR006458 -
Seca2g04884 278 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 40 192 IPR038933 GO:0045892
Seca2g04884 278 NCBIfam uncharacterized plant-specific domain TIGR01568 131 193 IPR006458 -
Seca2g04884 278 ProSiteProfiles OVATE domain profile. 132 191 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04884 Seca-Chr2 135302821 135303657 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca2g04884 Ovate 7.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04884 - - gmx:100803791 251.521