Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04835 ATGCTAGGGAAAAAGATGGTATCTATCAAGAAACTGGCTAAGAAGGTGAAGGTTGTTGGTGGAGTTGACCCTGACCCTAACCCTGCTCATTATGAGTGTTTGCTCAAGGTCAAGGAATTTGAAGAAGAGTACCCTATCAAAACCAAAAAAATACCCCCAACTGGGTGTTTTGCACTTTATGTTGGGGAAGAACGCCAGAGGTATGTGATTCCAACCCATTACCTTTCTCACCCCTTATTCAAGATGCTGTTGGAGAAAGCATACAATGAATTTGGGTTTGAACAGAGGAATGCCCTGGTTGTTCCATGCAGTGTTTCCACATTCCAGGAAGTGGTGAATGCTATAAAATGCAACAATAGCAAGTTTGACATGGAAAATTTTTTTGCAGAGTTTGTTTAA 399 0.411 MLGKKMVSIKKLAKKVKVVGGVDPDPNPAHYECLLKVKEFEEEYPIKTKKIPPTGCFALYVGEERQRYVIPTHYLSHPLFKMLLEKAYNEFGFEQRNALVVPCSVSTFQEVVNAIKCNNSKFDMENFFAEFV. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04835 132 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 111 IPR003676 GO:0009733
Seca2g04835 132 Pfam Auxin responsive protein 47 114 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04835 Seca-Chr2 134826745 134827143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04835 27 118 Calmodulin-binding Proteins AT5G20810 45.833 1.15e-20 81.3