Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04830 ATGGATACATCAAATCCTGCTGTCTTTGTCAATGCAGAACTATTACACTTCTATGTTGGAAGAAGGGTTCGGGCAGTGATGCAGGTTATGCGATCGGACGGTGTAGCTGTTATTGGAAAATCCACGGATGAGAAGCAGCTAGTTGTAAAAGGATCTCCACCACCTGCTCCTCTTACAACTTTTGTAGAAGTTATTGGTATTGTTGACAGCGATAAGTCTATCCGTGCTGAGACATGGACCAATTTTGGTGATGCAATTGGTATATGGTCAGCTACCAAAAGCTTTGTCAGCTTGCAAATGGAGAATTTAAACACTTGTTCCTGTGAGTTTATAACAAGCTTATCTGATGATACGAAGACCTCTCTATCATATGAAAAAGCTTTAGCCTAG 390 0.4103 MDTSNPAVFVNAELLHFYVGRRVRAVMQVMRSDGVAVIGKSTDEKQLVVKGSPPPAPLTTFVEVIGIVDSDKSIRAETWTNFGDAIGIWSATKSFVSLQMENLNTCSCEFITSLSDDTKTSLSYEKALA. 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04830 129 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 100 - -
Seca2g04830 129 Pfam Replication factor A protein 3 1 86 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Seca2g04830 129 SUPERFAMILY Nucleic acid-binding proteins 6 84 IPR012340 -
Seca2g04830 129 Gene3D - 2 105 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04830 Seca-Chr2 134786795 134788920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04830 1 88 Core DNA Replication Machinery Family AT4G18590 64.773 1.44e-37 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04830 K10740 - gmx:100306641 143.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04830 2 134786795 134788920 Seca2g04830 2 134786795 134788920 ECH
Seca2g04830 2 134786795 134788920 Seca2g04229 2 126556395 126568594 PCT