Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04811 ATGGTTGTGCAAGAGAGTGAGATGACCTCGCAAGGGGAAGTTGAATCTGTGCTACAGAGGGAACAAGAAGCTAACAAGAACAACAATTATCATCCATTTTCATCCTCACTTGGAAGACAATCATCCATATACTCTCTCACCCTTGATGAGTTCCAACATAGCCTATGTGAGAGTGGCAAGAATTTTGGGTCCATGAACATGGATGAGTTCCTTAGCAGCATATGGAATGCAGAAGAGAATCAACAACATCATGCCATCAACTCTTCTAATTCCAACCACCACAACATGATCAACAACAACAACAACTCTATTACACAAACTTCCACTCAGAAAGGGATAACAAAGCAACCAAGCCTTCCTCGCCAACCTTCACTATCCATTCCTGCACCTCTCTGCAGGAAAACAGTGGATGAAGTTTGGTCTGAGATACACAGAGAACAGAACAACAATAACAACAACATTGTTCAGAATACCGAGTCTGCCCCTCGCCAACCAACTTTTGGTGAGATGACTTTGGAGGATTTCTTGGTTAAAGCAGGGGTAGTTAGGGAACAACCATGTAACACAATGCAGCATGCTCTTCCTCCTACAGTTGCAGCCTCTCATCACCACCAACAACAGCAGCATTATGCAGTGTATCCAAATAACAGCTCTACAATTGCTCCTTCTTTTATTGGTGGTGGTGGAGCAGGGAATGTGGTTGCGCCGCCTTACCAAGGGGTGGCTCAGGGAAGTGGTGGGGTAGTTGGGGAGCCTTCTGGGTATGTTGGAAATGGGAAGAGGGATGGTACTAGTGGGTATCCTCCACCACCAGGGGTTTGCTTTGCAGGGAGAGTGGTGAATGGAGGGGGAGGTTTTGGAGTGGCACCTAGTATGGGAATGGGTGCACCTGTGAGCCCAGCTTCATCTGATGGAATAGGGAATGAAAATTCTGGTGGTCAATTTGGGCTTGACATGAGTGGTTTAAGAGGAAGAAAGAGAATGGTTGATGGTCCTGTGGAAAAGGTGGTGGAGAGAAGGCAGAGGAGGATGATCAAGAATAGAGAGTCAGCAGCCAGGTCTAGAGCCAGAAAACAGGCATACACAGTTGAATTAGAAGCAGAACTGAACCAATTAAAAGAAGAGAATGCTCAACTAAAACAGGCGCTGGCTGAGCTCGAGAGGAGAAGAAGGCAACAGTTTTTAGAGGAAGTGAACGTGAGAGTTCAGACCAAAGCTCAGAAGTTAAAAGAAAAATTGAGAGGCTTGAGAAGGAACCTGAGTTGTCCTTTGTGA 1275 0.4588 MVVQESEMTSQGEVESVLQREQEANKNNNYHPFSSSLGRQSSIYSLTLDEFQHSLCESGKNFGSMNMDEFLSSIWNAEENQQHHAINSSNSNHHNMINNNNNSITQTSTQKGITKQPSLPRQPSLSIPAPLCRKTVDEVWSEIHREQNNNNNNIVQNTESAPRQPTFGEMTLEDFLVKAGVVREQPCNTMQHALPPTVAASHHHQQQQHYAVYPNNSSTIAPSFIGGGGAGNVVAPPYQGVAQGSGGVVGEPSGYVGNGKRDGTSGYPPPPGVCFAGRVVNGGGGFGVAPSMGMGAPVSPASSDGIGNENSGGQFGLDMSGLRGRKRMVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLKQALAELERRRRQQFLEEVNVRVQTKAQKLKEKLRGLRRNLSCPL. 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04811 424 CDD bZIP_plant_BZIP46 339 393 - -
Seca2g04811 424 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 337 389 IPR004827 GO:0003700|GO:0006355
Seca2g04811 424 SMART brlzneu 335 400 IPR004827 GO:0003700|GO:0006355
Seca2g04811 424 MobiDBLite consensus disorder prediction 104 128 - -
Seca2g04811 424 SUPERFAMILY Leucine zipper domain 339 388 IPR046347 GO:0003700|GO:0006355
Seca2g04811 424 Gene3D - 337 389 - -
Seca2g04811 424 MobiDBLite consensus disorder prediction 104 122 - -
Seca2g04811 424 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 337 393 - -
Seca2g04811 424 Pfam bZIP transcription factor 339 389 IPR004827 GO:0003700|GO:0006355
Seca2g04811 424 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 38 407 IPR043452 GO:0003700|GO:0045893
Seca2g04811 424 Coils Coil 355 419 - -
Seca2g04811 424 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 342 357 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04811 Seca-Chr2 134650696 134652432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04811 1 393 bZIP Transcription Factor Family AT2G36270 51.794 6.29e-119 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca2g04811 bZIP_1 3.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04811 K14432 - gmx:100790948 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05182 8 141826217 141828602 Seca2g04811 2 134650696 134652432 PCT