Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04803 ATGGATAAAAACTTGAGTCTAAAAGTTGGTCTTGAATTCGATAATTTAGAAGATGCATGGAAATTTTGGGTGAATTACGGAGGCATAAAAGACTTTGGAGTTAGAAAACAATATTCAAGCAAGAGTAAGAAAGATGGTTCCGTTACGTCTTATACAGCGACCAATCCAAAACCTGAGACAAGAACGGGGTGTATGGCAAGAATGAAAGTCAAACGATTCAACGAAAAATACAAAGTGATTAATTTTGTTGATGATCATAATCACCCACTGCAACCACTAGAAATAGTGCATATGTTAGCTTCTCGACGAAGAATAACTGAACATCAAGCATATGAACTTGAAGTGGCAGGAGACACAGGGATTCAACAGAAGGCCTCATTTGATTTGATGAGTAAATATGTAGCAGGTAGAGACAATCTAGGGTATACTAGACAAGATGCAAAGAATTGTTTGAATTCGAGGAGGCGGCGAGATATGGCTTATGGTGAAGCTGGGTATTTGCTACAATATTTCCAACAACAATTGATAGATAACCCTTCTTTCTTCCATGCATACCAAATGGATTTGGAAGAGCAAATAACAAATTTATTTTGGGCTGACGCAGGAATGTTGTTTGACTATCATTGCTTTGGTGATGTCATTTCTTTGGATACCACATATTGTACAAATGGAGATCATCGACCCTTTGCATTTTCTCGAGATTCAACCATTATAGAGGAGTGA 723 0.3748 MDKNLSLKVGLEFDNLEDAWKFWVNYGGIKDFGVRKQYSSKSKKDGSVTSYTATNPKPETRTGCMARMKVKRFNEKYKVINFVDDHNHPLQPLEIVHMLASRRRITEHQAYELEVAGDTGIQQKASFDLMSKYVAGRDNLGYTRQDAKNCLNSRRRRDMAYGEAGYLLQYFQQQLIDNPSFFHAYQMDLEEQITNLFWADAGMLFDYHCFGDVISLDTTYCTNGDHRPFAFSRDSTIIEE. 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04803 240 PANTHER OS01G0519700 PROTEIN 3 223 - -
Seca2g04803 240 Pfam FAR1 DNA-binding domain 53 92 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04803 Seca-Chr2 134537490 134538212 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g04803 FAR1 1e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04803 - - vun:114184605 368.237