Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04797 ATGAAGATGATGGACTCCCACTCGCACAAGCAACTCTTCCCTCTCCTCTCTCTTTTCCTTATTCTACATCTCTCAGCTCAAAATTCACTTGATGGGTCTTATTTGCAAGCAGAGGCTCTCCTTCAACATCAGCAGCTAAATGATAACCCAACAAAATTGCTCGTTTTTGGAGACTCATATGCTGACACAGGTAACATAAGGAAAGGCTTGGCTAATTCATGGAAAGACCCTTATGGCATCACCTTTCCCGGCAAGCCCGCCGGTCGATTTTCCGACGGCAGGGTCCTCACTGACTACATCGCTAAGTATTTGAAAGTGAAATCGCCAGTCCCATACAGATTGAGGAAACTGATGCCACAACATCTAAAGTATGGGATGAACTTTGCATTTGGTGGAACTGGTGTGTTTGACACTTCGGTTCCAGCCCCAAACATGACAACACAGATCGATTTGTTGCAGCAGGTCATCAAATACAATGTGTACACTGCCTCAGATCTCTCCAACTCAGTCGCACTCGTCTCTGTCGCTGGAAATGACTATAGTCATTACTTGGCCACAAATGGCTCTGTTGAGGGTTTACCATCTTTTGTAGCCGCAGTGATTAATCAGACAAGCACGAACCTGATTCGCATCAAAGGGTTGGGAGTGAAGAAAATTGTTGTGAGCAATCTTCAACCCGTTGGATGCCTTCCTCGTATGACAGCCTCATCCTCATTCCAACATTGTAACGCCACATCCAACAACCTCGTACTTCTCCACAACGCACTCTTGAACGAAGCAGTTACCAAATTGAACCAATTAGAAACCAAAAACTCTTCTTCGGCGGCCTTCCTAGTTCTTAACATTTACGACAGCTTCATGTCGGTGTTGAACCACCCATCGACACATAACATTCAGAACGAGTTGATGCCATGCTGCGTTGGTGTGAGCAGTGAGTATTCATGTGGGAGTGTGGATGAGAAAAATAAGAATGTGAAGAAATATAGGGTGTGTGATGAGCCCAAATCGGCTTTCTTTTGGGATATGGTGCACCCTACGGAGGCAGGATGGCATGCGGTGTATAACAAGTTGAGAACCATGAATGCTCTTCAACAGATTCGTTACTAA 1107 0.4526 MKMMDSHSHKQLFPLLSLFLILHLSAQNSLDGSYLQAEALLQHQQLNDNPTKLLVFGDSYADTGNIRKGLANSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLKVKSPVPYRLRKLMPQHLKYGMNFAFGGTGVFDTSVPAPNMTTQIDLLQQVIKYNVYTASDLSNSVALVSVAGNDYSHYLATNGSVEGLPSFVAAVINQTSTNLIRIKGLGVKKIVVSNLQPVGCLPRMTASSSFQHCNATSNNLVLLHNALLNEAVTKLNQLETKNSSSAAFLVLNIYDSFMSVLNHPSTHNIQNELMPCCVGVSSEYSCGSVDEKNKNVKKYRVCDEPKSAFFWDMVHPTEAGWHAVYNKLRTMNALQQIRY. 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04797 368 CDD SGNH_plant_lipase_like 53 357 IPR035669 -
Seca2g04797 368 Pfam GDSL-like Lipase/Acylhydrolase 53 356 IPR001087 GO:0016788
Seca2g04797 368 SUPERFAMILY SGNH hydrolase 50 357 - -
Seca2g04797 368 Gene3D SGNH hydrolase 41 366 IPR036514 -
Seca2g04797 368 PANTHER OSJNBB0059K02.9 PROTEIN 21 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04797 Seca-Chr2 134478083 134482447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04797 47 353 Pollen Coat Proteome AT1G75930 26.748 3.88e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04797 - - gmx:100788092 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05199 8 142069558 142074935 Seca2g04797 2 134478083 134482447 PCT