Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04796 ATGGAACTCCAACCTTTTGCTATCTGCACGCTGTTTCAGTTTTTCACTAATGTCTCCTATTCCACACTGTTTTTTTCACTCATCACCCTTCTCATGATCGTGTTTCTCATCACTACTTTTTCATCACTCTCACTCTCACCTTGGTTTCCCAAGATTAACATTTTCTGTAGCTGTGAAACATGCCATGCTTATCTCACTTCAAGCTGGTCCAAAGACTTCGTTAATCTTTGTGATTGGTATTCTCATCTTCTCCGAAACTCACCTTCCAAAACCATCCACATCCACGTGCTTAAAAACACCATCACCGCCAACCCAGACAACGTTGAGTACATGCTCAAGACAAGATTCAATAATTACCCAAAAGGGAAAAACTTTTCCACCATCTTGGGTGATTTTCTAGGCCAAGGTATTTTCAACGTGGATGGTGAATTGTGGAGCTTTCAGAAAAAGATTGCAACTTTGGAGCTTAACAACAACAACTCCATAAGATCTTTCGCCTTCGATATTGTCCAATTCGAAATCCAACATCGACTTGTCCCTCTTCTATTGTCAAAGCAACACCATGATGATGTGTTGGATTTGCAAGATGTTTTTAAAAGGTTCTCTTTTGATACTATTTGTAAATTCTCTTTCGGATTGGACCCTATGTGTCTAGAGCTATCTCTGCCTATATCAGACTTTGCTCTTTCCTTTGACTTAGCATCAAAATTGTCTGCAGAGAGAGCCATGACAGTGTCCCCTTTTATTTGGAAGATGAAGAGGTTGTTCAATCTAGGTAGTGAGAAGAAGCTTCGAGAAGCTCTTAGAATGATCAATATCTTAGCCAAAGAGGTCATAAGGCAGAGAAGAAAAATGGGGTTTTCTAATAACAAAGACTTGTTGTCACGGTTCATGAGTACTATAAATGATGACACGTTTTTAAGAGACATTGTCATAAGTTTCTTATTAGCTGGTCGTGACACTGTGACTTCAGCACTCACAAGCTTCTTCTGGTTGTTGTCAAAACACCCTGAAGTAGGGACAGAGATTCTTCTAGAAGCAGAGGAGGTAATTGGGGCAGATAAGGAGCTTGAAGCCACAGTAGCCTTTCAACAATTGCAGAAATTGCAGTATTTACAAGCAGTAGTATATGAGAGCATGAGATTGTATCCCCCAATTCAATTTGATTCAAAGTTCTGTTTGGAAGATGATGTGTTACCTGATGGGACATCAGTTAAGAGTGGGACAAGGGTAACTTACCATCCATATGCAATGGGTCGGTTAGAGGAAATATGGGGTCCAGATTGTTTAGAATTCAAGCCACAAAGGTGGTTGAAGAATGGGGTGTTTTGTCCTCAAAGTCCATTTAAGTACCCAGTTTTTCAAGGAGGAATGAGGGTGTGTTTGGGGAAAGAAATGGCTCTGTTGGAGGTGAAAAGTGTGGCAATTTCATTGCTTAGGAGGTTCCACATCGAAATGGTATCACCACAGCATCACATCACTAACACACCACGTTTCTCTCCTGGCCTCACTTCTACTTTTAGTTGTGGCCTTCCTGTAAAGGTACGTGAACGAGGAACGAACCAAGCACACTCATAA 1578 0.4087 MELQPFAICTLFQFFTNVSYSTLFFSLITLLMIVFLITTFSSLSLSPWFPKINIFCSCETCHAYLTSSWSKDFVNLCDWYSHLLRNSPSKTIHIHVLKNTITANPDNVEYMLKTRFNNYPKGKNFSTILGDFLGQGIFNVDGELWSFQKKIATLELNNNNSIRSFAFDIVQFEIQHRLVPLLLSKQHHDDVLDLQDVFKRFSFDTICKFSFGLDPMCLELSLPISDFALSFDLASKLSAERAMTVSPFIWKMKRLFNLGSEKKLREALRMINILAKEVIRQRRKMGFSNNKDLLSRFMSTINDDTFLRDIVISFLLAGRDTVTSALTSFFWLLSKHPEVGTEILLEAEEVIGADKELEATVAFQQLQKLQYLQAVVYESMRLYPPIQFDSKFCLEDDVLPDGTSVKSGTRVTYHPYAMGRLEEIWGPDCLEFKPQRWLKNGVFCPQSPFKYPVFQGGMRVCLGKEMALLEVKSVAISLLRRFHIEMVSPQHHITNTPRFSPGLTSTFSCGLPVKVRERGTNQAHS. 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04796 525 PANTHER CYTOCHROME P450 48 492 - -
Seca2g04796 525 CDD CYP86A 91 514 - -
Seca2g04796 525 SUPERFAMILY Cytochrome P450 75 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04796 525 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04796 525 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04796 525 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04796 525 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04796 525 Gene3D Cytochrome P450 67 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04796 525 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04796 525 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04796 525 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04796 525 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04796 525 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g04796 525 Pfam Cytochrome P450 100 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04796 Seca-Chr2 134460905 134462482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04796 55 518 Cytochrome P450 AT2G27690 59.402 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04796 K20624 - gmx:102662117 795.038