Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04795 ATGAGTACTGCAATAAATCTGCTACTATTACTAGTACTACTTGTTTTTCGTTTACCCACATTGATCCAAGGATCAAATCAACATGAAAGAAAGCCGTATATTGTATACATGGGAGAACTACCAGCGACAAGAACCTATGCTGTGGAACAGCATCACCATAACTTGCTGGAGGCTGCAATTGGAGATAACCAATTAGCCAGAGCATCCAAAATACATAGCTTTGGAAAGAGCTTCAACGGATTCGTAGCACAACTCTTGCCACATGAAGCAGAGAAACTGCTAGAGGAGGACAATGTGGTATCTGTGTTTCCAAATACACGCCGCAAACTACACACAACAAGGACATGGGATTTTCTAGGAATGCCACTAAAAGTGAAGAGAAACCCCAACATAGAAAGCAATATCATAGTGGGCTTGTTAGATACAGGTATTTTTGTTGATTGCCCCAGTTTCGACGACACAGGGTATGGACCTCCTCCACGTAGATGGAAGGGCAAATGTGTAACTGGAGCCAATTTCACTGGTTGCAACAACAAGGTGATTGGGGCAAAATACTTCAATCTTGACCCAAGCAATCCAAGCATAGACAACCCTAGTCCGGCGGACGAGCAGGGCCACGGCACTCACACGTCGTCGACGGTGGTGGGAGGCGCTGTGAATGGTGCAAGTCTTTATGGGATCGGGGAAGGGACGGCACGTGGCGGTGTTCCATCAGCACGTGTCGCGATGTACAAAGTTTGTTGGAGTGTTGGGTGCAGTGACATGGACATGCTTGCTGCCTTCGATGAGGCCATAGCTGATGGCGTCAACTTCTTATCGGTGTCTATAGGAGGACCCTCACGTGACTTCTTCTCTGACCCAATTGCCATTGGATCATTTCATGCTATGAAGAGAGGGATTCTCACTTCTTGCTCCGCTGGAAATGATGGGCCTCGTCCTATGACGGTTGAGAATGTCGCTCCATGGATTTTGACGGTTGCTGCTACCACCCCTGATAGGCAGTTCATTACCCTTATGGCCTTTGGTGATGGAAAGAATGCCACAGGACTATCTATTAATACCTTTACCCCTGAGAAAAAGATGTATCCGTTGACCAGTGGACTCCTTGCTGCAAACCTTAGTGGAGATGGTTATGGAAGTCCCAGTGGTTGTGATTATGGGACTCTAAGCAAGGACAAGGTGAAGGGGAGGATAGTGTATTGCACTGGGGGTACGGGGAGCCAGGACATGACCATTAAAGAATTAGGGGGAGTAGGGACCATCGTAGGTCTTGATGAGAAAGTAGACGCCTCCTACACCACAGTTATTCCAGGGGTCTATATTGAAGCCTATACTGTGGGAAGAACCATTGAGCAATACATTAATTCCACAAAGAATCCTCAAGCAGTTATATACAAGACTACAAGTACACAAGTCCCTGCTCCATTTCTTGCTTCATTTTCATCTAGAGGTCCTCAACGTATCACCCCCAACATCCTCAAGCCTGACTTGGCTGCCCCGGGAATGGACATACTAGCTGCTTACTCCAAACTGGTAACAGTAACAGGGTACCCTGACGACACCCGTTATGATGTTTTTAACATAATGTCAGGAACATCTATGGCCTGTCCACATGTCGCTGGAGCTGCTGCCTATGTCAAATCCTTCCACCCTGATTGGAGTCCTGCTGCAATTAAATCTGCCCTCATGACCTCTGCCACTCCCATAAAAATTGGTGACAATTTCACAGAACTGGGATCTGGGTCAGGACAGATTAATCCAGTAAGAGCATTGCATCCTGGACTACTTTACGACATTAGAATGAACTCCTATGCTGCCTTCCTATGCAAGCAAGGCTACAACAGCACTAGCATTGGTATACTAATGGGGAACAAAAGATTTAATTGCTCAAGCGTTAAGCCTGCAAGAGGCACTGATGGAATCAACTACCCTACAATGCATGTCCAGCTCCTTAGTGCCGACTCTAAAATTTCTGCAGTTTTTCATCGGACTGTGACTAACGTAGGACTTGGAAGCTCAACATACAAGGCTAATGTCACAGCACCTAAGGGTCTTTCTGTGAAGGTCATCCCAGATACATTGCAGTTTAGTAAGTTGCACCAAGATCTGTCATTCAAGGTTGTCCTGAAGGGGCCTCCAATGTCGGATGAGACAATGGTGTTAACTGCATCACTTGAATGGAATGACTCTAAACACACTGTCAGAAATCCAATACTAGTCTTTAAACCACCATACTGA 2238 0.4611 MSTAINLLLLLVLLVFRLPTLIQGSNQHERKPYIVYMGELPATRTYAVEQHHHNLLEAAIGDNQLARASKIHSFGKSFNGFVAQLLPHEAEKLLEEDNVVSVFPNTRRKLHTTRTWDFLGMPLKVKRNPNIESNIIVGLLDTGIFVDCPSFDDTGYGPPPRRWKGKCVTGANFTGCNNKVIGAKYFNLDPSNPSIDNPSPADEQGHGTHTSSTVVGGAVNGASLYGIGEGTARGGVPSARVAMYKVCWSVGCSDMDMLAAFDEAIADGVNFLSVSIGGPSRDFFSDPIAIGSFHAMKRGILTSCSAGNDGPRPMTVENVAPWILTVAATTPDRQFITLMAFGDGKNATGLSINTFTPEKKMYPLTSGLLAANLSGDGYGSPSGCDYGTLSKDKVKGRIVYCTGGTGSQDMTIKELGGVGTIVGLDEKVDASYTTVIPGVYIEAYTVGRTIEQYINSTKNPQAVIYKTTSTQVPAPFLASFSSRGPQRITPNILKPDLAAPGMDILAAYSKLVTVTGYPDDTRYDVFNIMSGTSMACPHVAGAAAYVKSFHPDWSPAAIKSALMTSATPIKIGDNFTELGSGSGQINPVRALHPGLLYDIRMNSYAAFLCKQGYNSTSIGILMGNKRFNCSSVKPARGTDGINYPTMHVQLLSADSKISAVFHRTVTNVGLGSSTYKANVTAPKGLSVKVIPDTLQFSKLHQDLSFKVVLKGPPMSDETMVLTASLEWNDSKHTVRNPILVFKPPY. 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04795 745 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Seca2g04795 745 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Seca2g04795 745 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Seca2g04795 745 Pfam Peptidase inhibitor I9 33 111 IPR010259 -
Seca2g04795 745 SUPERFAMILY Subtilisin-like 110 595 IPR036852 GO:0004252|GO:0006508
Seca2g04795 745 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 111 IPR037045 -
Seca2g04795 745 Pfam Subtilase family 133 573 IPR000209 GO:0006508|GO:0008236
Seca2g04795 745 Gene3D - 332 470 - -
Seca2g04795 745 CDD PA_subtilisin_like 336 464 - -
Seca2g04795 745 Gene3D - 608 742 - -
Seca2g04795 745 CDD Peptidases_S8_3 109 567 IPR034197 -
Seca2g04795 745 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 739 IPR045051 -
Seca2g04795 745 FunFam Subtilisin-like protease SBT1.5 134 352 - -
Seca2g04795 745 Gene3D Peptidase S8/S53 domain 134 604 IPR036852 GO:0004252|GO:0006508
Seca2g04795 745 MobiDBLite consensus disorder prediction 192 214 - -
Seca2g04795 745 Pfam Fibronectin type-III domain 641 740 IPR041469 -
Seca2g04795 745 ProSiteProfiles Serine proteases, subtilase domain profile. 115 591 - -
Seca2g04795 745 ProSitePatterns Serine proteases, subtilase family, serine active site. 531 541 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04795 Seca-Chr2 134450903 134455871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04795 5 565 Subtilisin-like Serine Gene Family AT5G03620 61.579 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04795 - - gmx:100793716 1166.37