Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04794 ATGAGCACGATGGATGTGGAATTTGAGAAACGCTGTGCTTCCTCCTTGTCTTCGTCTTCTTCTTCGAGTGCGTCGGAGGAGGAGGAGCGGGTGGATCGGCTCGTGAAGACGGAGGAGATTGAGGCGGCGGAGACTCTGGCACAGTTGGCAATGCGCCAGATTGACGCCGCTGATAAATGGTGCACCAAACGAGACAGCACCCGAGTCACGCGCGAGTCACCGACTCTTCACTCGGATCCCTCTCCCTCTCCCCTTGCCATTGGGGGCCAAGCTGTTGCAGGTCAGCAGCTAGATGAAAAAAAATCCCCTACTACAGACGTAGAAACAGAAAGGATTCAACAGAATGACTGCTTAGGACACATGAAGGTGGACCAGGATGCTGATTTACCTAAGACTACAAGTTACTCTTCGGGTCGCTGCAACAAGTCAAGGCGTAATTTAACTGAGGAAGAAAAAGAAGCAAGGAGGATACGCAGGGTACTGGCAAATAGAGAGTCAGCTAGGCAGACAATTCGCCGTAGGCAGGCTCTGAGTGAGGAGTTAACCAGAAAAGCTGCCACTTTAGTGATGGAGAATGAAAACCTAAAGAAGGAGAAGGAGTTGGCTTTGAAAGAGTATCAATCTTTGGAGACTACAAATAGACACTTAAAGGCACAGATAGCCAAGTCAATAAACACCGAAGTGGAGAAAACTCCTGTTGAGCAGGAGTCATCTGTGGCTGAGGTAACACCTGTGTCTGGCAGTAGTCCATGGTTTCTTTATAACCATTTTCCAGTTACACAGTTATTCTGGCCTTCCATCCTCCAGTCTTCTAATCCAGTTCAATTACAACATACACCATTTAATTCCATTGCCATTCCACCACATGTTTATGTGCCTTCTTCTGAGTCTGAATCATGTCACAATCAAAATAACCTCATAAATGACAATCAAACTCAAAATCCGTTGTACATGTTTCCATGTCCTTGGTTATACCCTCTTCCAGAATATGGAAATGGACTATCACCGCCTTCCAGTGGCCATAAACAAGATAAACTTCCTCTAGGTAAACAATATAATACTGCTTTATCTTTAAATACAATGGCAAATGTGGATTATCAAGCAGCACTACCTATCAAACTTAAAACAGAAGCCAGATCTATTGATGACTCTGGTTGTGCCACTCTGAGTTTTTCTTCAGATGGAGGTGAGCAGAAAACAGGAGGTCACATTATAGAAAAGTTCCATGGACAAGCATTTGGTTGTAATAGTGATGCTTCTGCTGTCAAGCAAGAACCTGAGCTTCAATTACATTCTGCTCCCAACGCTGAGGTATCTTCTTCAACAACTTCTTCGGTGGAAAAGAAGCAAGAACAGTTCATATGCCCAGGTAAAAATCTAGTGGATGCAGTTGCTGCAGCAGAGGCCAGAAAGAGGAGAAAGGAACTAACAAAGCTAAAAGGCATCCATAATCGCCAGTCCCGGATGGAGTGTTGA 1476 0.4499 MSTMDVEFEKRCASSLSSSSSSSASEEEERVDRLVKTEEIEAAETLAQLAMRQIDAADKWCTKRDSTRVTRESPTLHSDPSPSPLAIGGQAVAGQQLDEKKSPTTDVETERIQQNDCLGHMKVDQDADLPKTTSYSSGRCNKSRRNLTEEEKEARRIRRVLANRESARQTIRRRQALSEELTRKAATLVMENENLKKEKELALKEYQSLETTNRHLKAQIAKSINTEVEKTPVEQESSVAEVTPVSGSSPWFLYNHFPVTQLFWPSILQSSNPVQLQHTPFNSIAIPPHVYVPSSESESCHNQNNLINDNQTQNPLYMFPCPWLYPLPEYGNGLSPPSSGHKQDKLPLGKQYNTALSLNTMANVDYQAALPIKLKTEARSIDDSGCATLSFSSDGGEQKTGGHIIEKFHGQAFGCNSDASAVKQEPELQLHSAPNAEVSSSTTSSVEKKQEQFICPGKNLVDAVAAAEARKRRKELTKLKGIHNRQSRMEC. 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04794 491 MobiDBLite consensus disorder prediction 101 127 - -
Seca2g04794 491 Coils Coil 178 219 - -
Seca2g04794 491 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 153 216 IPR004827 GO:0003700|GO:0006355
Seca2g04794 491 MobiDBLite consensus disorder prediction 60 151 - -
Seca2g04794 491 PANTHER G-BOX-BINDING FACTOR 3-RELATED 20 280 IPR044827 GO:0003700|GO:0006355|GO:0043565
Seca2g04794 491 SMART brlzneu 151 215 IPR004827 GO:0003700|GO:0006355
Seca2g04794 491 Coils Coil 140 160 - -
Seca2g04794 491 Pfam bZIP transcription factor 151 213 IPR004827 GO:0003700|GO:0006355
Seca2g04794 491 SUPERFAMILY Leucine zipper domain 155 210 IPR046347 GO:0003700|GO:0006355
Seca2g04794 491 CDD bZIP_plant_GBF1 156 207 IPR045314 GO:0003700|GO:0006355
Seca2g04794 491 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04794 Seca-Chr2 134445859 134450904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04794 137 491 bZIP Transcription Factor Family AT1G19490 35.676 1.28e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca2g04794 bZIP_1 9.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04794 - - gmx:778152 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04794 2 134445859 134450904 Seca2g04794 2 134445859 134450904 ECH