Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04789 ATGGAGGTCTCAGGCGATGATGAACACGTTATCCTGGTTTGCACAAATCCTGATTCAACGGAAACTCTTAACCAAGAGATTCTCGTTTCGACCACAGATACCCTCACTTGGGATTTGCCAACGATTCTCACTTTCCAGACGATCAAAGTTAACGCACATCGTAATAGGCTCATTGAACAATCTCTGTATTTCCGAGGCCTACTCAGCGGGAGCTTCAGTGAATCATGCTTGGGCTCTATCACAATCAAGTGGAATGTGCGTGTGTTTATGCAAATTCTCAAGCATATGTATGGCTGCCCATTGGATATTACGATAGACAATGTCCTCCCTCTTTATGAGGGTGCGCTTTATTTTGGAGTGGAGACACTTCTCTTAAAGTGTGAGACATGGTTTTCTGAGGTATTCTCACCCAAAGGATTTCAATCAACACAAATACAAGTGGAGGATTTGATCCAAATTTGGAAATTTGGCTTAGATCATGCAAGTGACTTAATCCTGCACTTATGTATGGGCTACCTAGCAAGAAATTTTATGAGGGCAATGCATAGCAATTTTTTTGGAAAACTTCCATATGACCTGCTGTTATCTGCAGTAAAGCACCCTCACTTGACTGTTGACAGGTTGACTGATTATTTATGA 639 0.4163 MEVSGDDEHVILVCTNPDSTETLNQEILVSTTDTLTWDLPTILTFQTIKVNAHRNRLIEQSLYFRGLLSGSFSESCLGSITIKWNVRVFMQILKHMYGCPLDITIDNVLPLYEGALYFGVETLLLKCETWFSEVFSPKGFQSTQIQVEDLIQIWKFGLDHASDLILHLCMGYLARNFMRAMHSNFFGKLPYDLLLSAVKHPHLTVDRLTDYL. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04789 212 Pfam BTB/POZ domain 43 130 IPR000210 GO:0005515
Seca2g04789 212 PANTHER KELCH PROTEIN 47 206 - -
Seca2g04789 212 ProSiteProfiles BTB domain profile. 39 105 IPR000210 GO:0005515
Seca2g04789 212 CDD BACK 147 200 - -
Seca2g04789 212 CDD BTB_POZ_ZBTB_KLHL-like 42 118 - -
Seca2g04789 212 SUPERFAMILY POZ domain 42 131 IPR011333 -
Seca2g04789 212 Gene3D Potassium Channel Kv1.1; Chain A 38 184 IPR011333 -
Seca2g04789 212 SMART BTB_4 41 135 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04789 Seca-Chr2 134306064 134308214 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Seca2g04789 BTB 9.6e-08 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04789 - - lja:Lj4g3v1199760.2 353.599