Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04762 ATGGCATGCCTGGGGGAGGTCAGTAAGGATAAAGGGGGTGAATCAGTAACCCTGTATGTGAAATTTGGTGACCAGAAGCTTCTGCTTGGAACACTTTCTTCTGAGAAGTTTCCGCAGATATCTTATGATTTGATATTTGAGAAGGAATTTGAGCTATCCCATAACTGGAAAAATGGGAGTGTCTTCTTTACTGGATTTAAAGCCGAATCCCAGTTGGTGTCATATCCTTTTTTAATACTATACTCTGAAAATAGATCAAATTTTCTCTTAAAAATTTTGATGATGAAGATATTCCAGTCAGTGCTGCCAATGGTAAAGATATTCACCTTGTGGAGTTTTTTTGTTATAAAGCAGTTTCACGTAATGTATATTCTAAACATTTATATAGGGAAACCTGAGTTTGAGGTGAAGAACAGTATCAAACCTGATGCAATTGAAGCTAAACGAAAGGAGAAGATAGCAGACCCAACAAAAAAGGCGAAGGCTAATGAAAAGGATGCAAATGGTGAAGATGAAGAAGATTCATCTGAATCAGAGTCTGATGAGGATTCTAGTGAAGATGAGCCCATGCCAAATGGTGGGATAGAAAGTAGTGAAGGTGACGATGACGATGATGATGATGAAGAAGAGGAGACACCTAAGAAGACTGAAGGGAGAAATAAGAGGGTAGTTGAATCTCCCAAGAAAACACCCGTTCCTGCGAAGAAGGCAAAATTTGTTACTCCTCAGAAGGCTGGTACTGATGGCAAGAATGGTGGCCATGTTGCAACTCCTTACCCTTCTAAGCAGGCTGGTAAGGCAGCTGCAAATAGCAAGCAGCTGGGTAAGCCGCAGACTCCAAAGTCTGGTGGAGATTACAGCTGCAAACCTTGCAACAGGTCATTTAAGACAGAAGATGCCATAAATTCTCATAATAGGGCCAAACACAGTGCTAAGTGA 939 0.4089 MACLGEVSKDKGGESVTLYVKFGDQKLLLGTLSSEKFPQISYDLIFEKEFELSHNWKNGSVFFTGFKAESQLVSYPFLILYSENRSNFLLKILMMKIFQSVLPMVKIFTLWSFFVIKQFHVMYILNIYIGKPEFEVKNSIKPDAIEAKRKEKIADPTKKAKANEKDANGEDEEDSSESESDEDSSEDEPMPNGGIESSEGDDDDDDDEEEETPKKTEGRNKRVVESPKKTPVPAKKAKFVTPQKAGTDGKNGGHVATPYPSKQAGKAAANSKQLGKPQTPKSGGDYSCKPCNRSFKTEDAINSHNRAKHSAK. 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04762 312 MobiDBLite consensus disorder prediction 264 280 - -
Seca2g04762 312 MobiDBLite consensus disorder prediction 150 287 - -
Seca2g04762 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 286 312 IPR013087 -
Seca2g04762 312 ProSitePatterns Zinc finger C2H2 type domain signature. 288 309 IPR013087 -
Seca2g04762 312 MobiDBLite consensus disorder prediction 212 232 - -
Seca2g04762 312 MobiDBLite consensus disorder prediction 169 189 - -
Seca2g04762 312 MobiDBLite consensus disorder prediction 197 211 - -
Seca2g04762 312 Gene3D Nucleoplasmin core domain 1 72 - -
Seca2g04762 312 MobiDBLite consensus disorder prediction 150 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04762 Seca-Chr2 133879484 133883740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04762 2 67 C2H2 Transcription Factor Family AT3G44750 60.606 6.78e-20 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca2g04762 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04762 - - lang:109334297 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04762 2 133879484 133883740 Seca2g04762 2 133879484 133883740 ECH