Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04750 ATGGCATTGGCATTGGTTTTGTTGTTGGCATTACTCTGCGTGGCACAGAGTGCACCCCAGAATGATACACACGCCCTCACCCAATTCCGCCTCCAAACCGACACTCACGGTTACCTCCTCGGTAACTGGACCGGCGACGACGCTTGCACCGCCGCATGGCGCGGCGTTGAATGCTCCCCAAACGGCAGAGTAGTAGGTCTCTCCATTCCTTCCCTTAATCTCCGAGGCCCAATTGATTCTCTTTCACCACTCTCCTACTTGCGCTTCCTCGATCTCCACGATAACCGTTTAAACGGCACCATTACCCCTCTTTCCAACTGCACCAGCCTGGAACTCCTCTACCTCGCCGGCAATGACTTCTCCGGCGAGATACCGCCGGAGATAGCTTCCCTGAGACTCCTTCTCAGGCTAGACCTCTCCGATAACAACATCCGCGGCCCAATCCCTAACGAACTCTTGAAGCTAACTCATCTTCTCACACTTCGTCTTCAGAACAACGCACTCTCTGGCCAAATCCCTGATCTTTCTTCTTCCCTTCTCAACCTCAGCGAACTCAACATGACAAACAACGAACTCCATGGACACTTGCCCGACGCCATGTTCAAGAAATTCGGCAATGCAAGCTTCTCCGGCAACGACGGTCTTTGTGGGTCAACCCCATTGCCGGTTTGTTCCATGACAGAGTCAGAGACCCCTTCCACTTCTTCCTCTTCTTCTTCTTCAACTGTTCCTTCAAACCCAAGCTCGTTGCCACAAACAAGTGGCATAATTGCAACTCCTCCAAAGCGGAAAAAGGGGTTGAATCCTGGAACCATTGTGGCGATTGTGGTGGCGGTTTCTGTGGCTTTAGTGGTGGCGGTTTCTTTTGCGGTGGCTCATTGTTGTGCCAGGGGAGGAAGCTCGAACTCGACGGTGGGGAGTGAGAGTGGGAAGAGGAAGAGTGAGAGTAGCCATGGAAGCGAGAAGAAAGGGTATTATGCAAATGGTGGTGTGGATAGAGATAGTGATGGGACGTGTACTGAGACAGAACGAAGCAAGCTTGTGTTTTTTGATAGGAAGAGTCAGTTTGAGTTGGAAGATCTGCTTCGTGCATCTGCAGAGATGCTTGGGAAAGGTAGCTTAGGGACGGTTTATAGAGCAGTGCTTGATGATGGATGCACTGTGGCTGTGAAGAGACTCAAGGATGCAAATCCATGTGAAAGGAACCAGTTTGAACAGTATATGGATGTTGTAGGAAAGCTCAAGCACCCCAACATTGTTAGACTCAGAGCTTATTACTATGCTAAGGAAGAAAAACTTCTTGTCTATGATTATCTCCCCAATGGAAGCTTACAAGCTCTTCTTCATGGGAACCGTGGTCCAGGAAGGATTCCATTAGATTGGACCACAAGAATAAGTTTGGTATTGGGGGCAGCAAGAGGGCTAGCTAGGATTCATGCAGAGTATAATGCAGCCAAGATACCTCACGGGAATGTTAAATCTTCCAATGTGCTTCTTGACAAGAATGGGGTTGCTTGCATCTCTGACTTTGGGCTGTCACTACTGTTGAACCCTGTTCATGCCATTGCGAGATTGGGTGGGTACAGAGCTCCTGAACAAGCAGAGGTGAAGAAGCTGTCTCAGGAAGCTGACGTGTACAGTTTTGGTGTGTTGTTGTTGGAGGTTCTCACAGGGAGAGCTCCTTCTCTGTACCCTTCTCCAGCTCGTCCTAGAGTGGAGTTAGAGGAACAAGAGGTGGATCTTCCCAAATGGGTAAGGTCGGTTGTGAAGGAAGAGTGGACTTCAGAGGTGTTTGATCAGGAACTGTTGAGGTACAAGAATATTGAGGAAGAGCTTGTGTCCATGCTGAATGTGGGGTTGGCTTGTGTGGTGCCACAACCTGAGAAGAGGCCAAACATGTTGGAAGTTGTGAAGATGATTGAGGATATAAGAGTGGAACAATCTCCTCTTAGAGGAGAAGATTATGATGAATCACGCAATTCACTCTCACCTTCACTTGCCACCACTGAAGATGGATTGGCTTAA 2025 0.4904 MALALVLLLALLCVAQSAPQNDTHALTQFRLQTDTHGYLLGNWTGDDACTAAWRGVECSPNGRVVGLSIPSLNLRGPIDSLSPLSYLRFLDLHDNRLNGTITPLSNCTSLELLYLAGNDFSGEIPPEIASLRLLLRLDLSDNNIRGPIPNELLKLTHLLTLRLQNNALSGQIPDLSSSLLNLSELNMTNNELHGHLPDAMFKKFGNASFSGNDGLCGSTPLPVCSMTESETPSTSSSSSSSTVPSNPSSLPQTSGIIATPPKRKKGLNPGTIVAIVVAVSVALVVAVSFAVAHCCARGGSSNSTVGSESGKRKSESSHGSEKKGYYANGGVDRDSDGTCTETERSKLVFFDRKSQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCERNQFEQYMDVVGKLKHPNIVRLRAYYYAKEEKLLVYDYLPNGSLQALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYNAAKIPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQAEVKKLSQEADVYSFGVLLLEVLTGRAPSLYPSPARPRVELEEQEVDLPKWVRSVVKEEWTSEVFDQELLRYKNIEEELVSMLNVGLACVVPQPEKRPNMLEVVKMIEDIRVEQSPLRGEDYDESRNSLSPSLATTEDGLA. 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04750 674 MobiDBLite consensus disorder prediction 225 263 - -
Seca2g04750 674 MobiDBLite consensus disorder prediction 298 338 - -
Seca2g04750 674 Pfam Protein kinase domain 367 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g04750 674 Gene3D Transferase(Phosphotransferase) domain 1 439 663 - -
Seca2g04750 674 ProSiteProfiles Protein kinase domain profile. 363 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g04750 674 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 439 653 - -
Seca2g04750 674 Pfam Leucine rich repeat N-terminal domain 20 59 IPR013210 -
Seca2g04750 674 SUPERFAMILY L domain-like 20 202 - -
Seca2g04750 674 SUPERFAMILY Protein kinase-like (PK-like) 367 640 IPR011009 -
Seca2g04750 674 Gene3D Ribonuclease Inhibitor 82 232 IPR032675 -
Seca2g04750 674 Gene3D Ribonuclease Inhibitor 15 81 IPR032675 -
Seca2g04750 674 Gene3D Phosphorylase Kinase; domain 1 333 438 - -
Seca2g04750 674 MobiDBLite consensus disorder prediction 225 256 - -
Seca2g04750 674 MobiDBLite consensus disorder prediction 649 674 - -
Seca2g04750 674 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 645 IPR046959 -
Seca2g04750 674 CDD STKc_IRAK 369 643 - -
Seca2g04750 674 FunFam Nuclear pore complex protein NUP107 19 174 - -
Seca2g04750 674 FunFam pollen receptor-like kinase 1 333 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04750 Seca-Chr2 133766517 133769772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04750 20 670 Receptor kinase-like Gene Family AT2G36570 66.617 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Seca2g04750 Pkinase 2.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04750 - - gmx:100808402 988.408