Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04749 ATGAAGTCTATGAAGTCTGTCATATTGGAGAAATGGTGGACAGATATTCCAAATGGGAAAGTTTATTATTGTAAGAAACAGAAGCTTGGACAAGGTGGTTTTGGTGGATTTTATAAAGGTTATTTGACAGCTTCAAACTCATATGCTGGTATAAAGAGGATATCAGCAAATTCAAGACAGGGTATAAAGCAATACGCAGCAGAAGTGAATATCATCAGCCAATTGAGGCATAGGAATTTGGTAAAACTCACAGGTTGGTGCCACAAGAAGAATGATCTACTACTGATAAATAAGTACATGCCAAATGGAAGCTTAGATTCTCATCTTTTTGGTGGAGAAAGCATCTTGTCGTGGCAAGTGAGAAACAACATAGCTCTAGGCTTGACCGCAGCATTGCATTACCTACAAGAAGAATGGGAAAAATGTGTGCTTCATAGGGACAACAAATCAAGCAACATAATGTTGGACTCCAACTTCAATGCTAAGCTTGGGGATTTTGGCCTAGCTAGGCTGGTGGATCCTGAGAAAGGGTCACAAACCACAACTGTGGCTGGGACCATGGGTTATCTAGCCCTTGAATATATGAACTCCGGCAAATGTCGAAAGGAATCTGACATATTCAGTTTTGGGGTTGTTTTGTTGGAGTTAGCCAATGGAAGAAGAGCCATTCGTCACCAAGACATGGAGGGTGAAGTATCATTAGTTGAGTGGGTATGGGAGCTCTATGGATTGAGAAATCTCTTTGCAGCAGCAGACCCAAAGCTTTGTGGAGTATTTGATGTGCAGCAAATGGAACGTTTACTGGTTGTTGGCCTTTGGTGTGCTAATCCAGATTGCAAATTCAGGCCCTCTATAAAGCAAGTGATTAAGGTGCTTAACTTTGAAGCTCCTTTACCAATTCTCCCATAA 909 0.4125 MKSMKSVILEKWWTDIPNGKVYYCKKQKLGQGGFGGFYKGYLTASNSYAGIKRISANSRQGIKQYAAEVNIISQLRHRNLVKLTGWCHKKNDLLLINKYMPNGSLDSHLFGGESILSWQVRNNIALGLTAALHYLQEEWEKCVLHRDNKSSNIMLDSNFNAKLGDFGLARLVDPEKGSQTTTVAGTMGYLALEYMNSGKCRKESDIFSFGVVLLELANGRRAIRHQDMEGEVSLVEWVWELYGLRNLFAAADPKLCGVFDVQQMERLLVVGLWCANPDCKFRPSIKQVIKVLNFEAPLPILP. 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04749 302 Gene3D Phosphorylase Kinase; domain 1 15 99 - -
Seca2g04749 302 FunFam Lectin-domain containing receptor kinase A4.3 100 302 - -
Seca2g04749 302 ProSiteProfiles Protein kinase domain profile. 23 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g04749 302 SUPERFAMILY Protein kinase-like (PK-like) 22 294 IPR011009 -
Seca2g04749 302 Gene3D Transferase(Phosphotransferase) domain 1 100 299 - -
Seca2g04749 302 Pfam Protein kinase domain 24 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g04749 302 PANTHER - 25 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04749 Seca-Chr2 133750353 133751426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04749 13 302 Receptor kinase-like Gene Family AT5G10530 54.949 7.98e-114 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca2g04749 Pkinase 8.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04749 - - cam:101492002 437.573