Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04745 ATGGCAAATCGTTTTGATTTAATCAAAGATATTAATGCTGCTTCTGAACAGAAGGTTTGGAGAATTAAAGTTAGAGTTATTCGGCAATGGAGATCTGCTAATTTTAAAGATTCTTCCCATAAACCTATGATTGAAATGGTTGTTTTGGATGAAGAGGGAGGTCGTATCCAGTGCACTGTGAAGAGCATTCATGTCTATTTGTTTGAGGGTATTGTCCTGGAAGGCAATGTTTACATGATTGAAAACGTTTCTGTTGCACTTAATAGTGCGAAGTTCAAACCAACAGTGCATGAATTTCGACTGTTTTTCAAGAGAGAAACACAAGTTCGTATGATTGAGGATTCTAACATTCCAACAAATGGTTTTTGTTTTGTCCCATTTACTGATATTCTGAACATAAAGAATGATGAAAGTCGCTTGGTTGGTAAGATGTATTTCATTATAAAATATATCAATATATTGAACCAATTTATTTTATAA 480 0.3333 MANRFDLIKDINAASEQKVWRIKVRVIRQWRSANFKDSSHKPMIEMVVLDEEGGRIQCTVKSIHVYLFEGIVLEGNVYMIENVSVALNSAKFKPTVHEFRLFFKRETQVRMIEDSNIPTNGFCFVPFTDILNIKNDESRLVGKMYFIIKYINILNQFIL. 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04745 159 Gene3D - 7 115 IPR012340 -
Seca2g04745 159 Pfam Domain of unknown function DUF223 45 133 IPR003871 -
Seca2g04745 159 FunFam Replication protein A subunit 6 114 - -
Seca2g04745 159 CDD RPA1_DBD_A_like 21 109 - -
Seca2g04745 159 SUPERFAMILY Nucleic acid-binding proteins 5 114 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04745 Seca-Chr2 133704424 133704996 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04745 17 136 Core DNA Replication Machinery Family AT2G06510 29.134 7.45e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04745 - - adu:110274503 168.703