Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04724 ATGGACACAGTACTGCTGGTGCCTCCTTGGCTTGAACCATTGCTACGCACACCATTCTTCAACGTGTGTCGGATTCACGCAGATGCTGCTAGGAGTGAATGTAACATGTATTGCTTAGATTGCCATGGCGATGCCTTTTGCTTTTATTGCCGTTCTTCAAGACACAAAGATCATCAAGTCATTCAGGTGATAAGACGATCTTCTTATCACGATGTAGTGAGGGTCGCAGAAATTCAGAAGGTGTTGGACATTAGTGGAGTACAAACGTATGTGATAAACAGTGCTCGAGTTCTGTTCCTGAATGTGAGGCCTCAGCCAAAAACTGGAAAAGGGGTAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGCTTCTGTTCTTTGGGATGTAAGCTTGAAGGAATAAAGAAAAATGGGAATGCAAGCTTTATTTTGGATGGTAAAAATAATGAAGCATTGACAATGGATACTACAAGGGAGGGGATGTCAAGATCTAGACAACAAGAAGGAGAATTGCGTGAAGGCTCAACACAAGACATGTATCTGGCCACGCCTCCTCCACCCCCTTCAAATGCAAGGAGAAGAAAAGGGATTCCTCATAGGGCACCTTTTGGATCTTAA 633 0.4392 MDTVLLVPPWLEPLLRTPFFNVCRIHADAARSECNMYCLDCHGDAFCFYCRSSRHKDHQVIQVIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNVRPQPKTGKGVAHICEICGRSLLDPFRFCSLGCKLEGIKKNGNASFILDGKNNEALTMDTTREGMSRSRQQEGELREGSTQDMYLATPPPPPSNARRRKGIPHRAPFGS. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04724 210 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 208 - -
Seca2g04724 210 Pfam PLATZ transcription factor 65 136 IPR006734 -
Seca2g04724 210 MobiDBLite consensus disorder prediction 160 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04724 Seca-Chr2 133475982 133478329 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca2g04724 PLATZ 6.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04724 - - gmx:100803076 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05262 8 143135344 143137775 Seca2g04724 2 133475982 133478329 PCT