Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04682 ATGGCTCGCACTATCTCGTACATTACAGGGTCGCAGCTTCTCTCTCTGAGACGCCTACCAACACCGAGCATCGCCATCGTTGATGTCAGGGACGACGAGAGGAGTTACGATGGGCACATATCGGGGTCTCTTCACTACGCAAGCGACAATTTCTCCGAAAACATGTCAAAGCTTCTTCAGGAAGTTAAAGGCAAAGACACCCTCGTCTTCCACTGCGCTCTAAGTCAGGTTCGTGGCCCAACTTGTGCTAGGAAGCTTGCTAATTATCTGGAGGAGAGTAAGGAAGATGTTGGAATAAAGAACATTATGATCTTAGAACGTGGCTTCAATGGGTGGGAAGCTTCTGGTAGACCTGTCTGCCGCTGCACTAATGTTCCTTGCAAGGAGAGTGAGAGTGCTTAA 402 0.49 MARTISYITGSQLLSLRRLPTPSIAIVDVRDDERSYDGHISGSLHYASDNFSENMSKLLQEVKGKDTLVFHCALSQVRGPTCARKLANYLEESKEDVGIKNIMILERGFNGWEASGRPVCRCTNVPCKESESA. 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04682 133 Pfam Rhodanese-like domain 19 114 IPR001763 -
Seca2g04682 133 ProSiteProfiles Rhodanese domain profile. 20 121 IPR001763 -
Seca2g04682 133 FunFam Dual-specificity phosphatase CDC25 1 132 - -
Seca2g04682 133 SMART rhod_4 10 118 IPR001763 -
Seca2g04682 133 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 4 128 IPR036873 -
Seca2g04682 133 Gene3D - 1 132 IPR036873 -
Seca2g04682 133 PANTHER M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 5 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04682 Seca-Chr2 132992429 132995206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04682 1 77 Sulfurtransferasese or Rhodanese AT5G03455 70.130 1.01e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04682 K18065 - gmx:100305790 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04682 2 132992429 132995206 Seca2g04682 2 132992429 132995206 ECH