Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04672 ATGGGTGATGATAGCGTTGATTTAACTGCACCAACAAAAGGCTTAAATTATCTGTTGGAGGAATGGTTTCCTGAGTGTAATAAAGAAATCAAACCTGTAGTTGGCAGAGTCTTTGATACTTTAGAACAAGGAGGGGATTTTTATCAAAGGTATGCACATATTGTTGGTTTTAGTGTACGTAAAGCAACGGAAACGAAAGATAAAAATGGAGAAATAAAGTGGAAATATTTTCTTTGCTCTAAAGAAGGCTTCAAATTAGAGAAAAAAGAAGTTGTAACTGAGTTGCTTGTTGATGATAAAAAGATGCCTAAAACCAGACGAAGAAAACTAACAAGGGAAGGATGTAATGCAAGGATTGTTTTTAAGAAGACACAAGAAGGAAAATATGAAGTGGTGCGATTTCATGAAAGTCATACACATGCATTAGCTACACCTAAAAAAAGCAATTCTTAA 453 0.3422 MGDDSVDLTAPTKGLNYLLEEWFPECNKEIKPVVGRVFDTLEQGGDFYQRYAHIVGFSVRKATETKDKNGEIKWKYFLCSKEGFKLEKKEVVTELLVDDKKMPKTRRRKLTREGCNARIVFKKTQEGKYEVVRFHESHTHALATPKKSNS. 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04672 150 Pfam FAR1 DNA-binding domain 46 143 IPR004330 -
Seca2g04672 150 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 26 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04672 Seca-Chr2 132891737 132892189 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g04672 FAR1 3.8e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04672 - - tpra:123895784 173.711