Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04664 ATGCACGGTGGAGAAACAAAAAGGTTCATTGTTGAATTAGATTACTTAACTGACCCTGCTTTCTTGAGATTGCTGGAAGAGGCTAAGGAAGAGTATGGGTTTCAACAGAAGGGTGCTCTTGCAGTTCCTTGTAGTCCCCAACAACTTGAGTACATTATACAGATACAAAAGAGTCTCTCACTCTTTGTACTCAGAAGGACTGCACTACACTTGAATGAAGATCAACAGGAAATTGCAACCTCAGTGCCAGATGATGTTATGGAAGGACATTTTGTTGTTCTTGCTACCAAAGGTGAGGAAAGCAAAAGGTTTGTTGTTAAGTTAGATTACTTGAGTGACCCTGCATTCTTGAGACTACTGGACCAAGCTAGGGAAGAGTTTGGTTTCAGGCAGAAAGGAGCTCTTGCAGTCCCTTGCCGGCCTCAAGAATTACAGAAGATTCTAGATGATCCAAAAGCATAG 462 0.4221 MHGGETKRFIVELDYLTDPAFLRLLEEAKEEYGFQQKGALAVPCSPQQLEYIIQIQKSLSLFVLRRTALHLNEDQQEIATSVPDDVMEGHFVVLATKGEESKRFVVKLDYLSDPAFLRLLDQAREEFGFRQKGALAVPCRPQELQKILDDPKA. 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04664 153 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 75 147 IPR003676 GO:0009733
Seca2g04664 153 Pfam Auxin responsive protein 77 148 IPR003676 GO:0009733
Seca2g04664 153 Pfam Auxin responsive protein 4 54 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04664 Seca-Chr2 132756253 132762481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04664 3 55 Calmodulin-binding Proteins AT4G34750 47.170 2.28e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04664 - K14488 gmx:100808634 136.732