Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04657 ATGGAGCATGAAGTGACTCAAGATGATATAGTCCCATATGTTGGCATGGAGTTTGATACAGAAGATCATGCATATAGATTTTACAATATGTATGCTGGCTTCATTGGTTTTAGTGTTAGAAAAGATTGGAGAAATAAAAGCAAATTAGATGAGGAGATTGTGATATCTCGAAAATTTGTTTGTTTTAAAGAGGGCTTCAAAAAGGTTAAAGGCCATGAAAGAAAAATGACCCGTAAAGATATTAGAACTGGATGTTTAGCACACATGGTCATTGGTCGACAATTGAGTGGAAAATATATTGTTACATCTTTTGTAAAAGACCATAATCATGAGCTTGCAACCCCCAAGAGTAGGCATAAATTACCATCACAAAGAAGGGTTTCTATTGCTCAAGCAGCTGAAGTTGAAATGGCGAATCGTTCTGGTATACGGAAAAAGTTAATTTTTGAGTTTATGAGTCGCCAGGTTGGGGGGAGAGAGAATGTTGGTTGCACTGCTAAAGATATCAACAATCATTTGAATTCTAAGAGGATGAAAGAGATGGAAGAAGTTATTCCACCAAAATATATCCTGAAGAGGTGGACTAAGAATGCTCGAAGTGGATGTGTTCTAGACAACAAGGGACAAATTATCAAAGAAGATCCAAAATTGGCTGTCTCAAATCGCTTTAAGGATTTGTGTCGTACTGCAGTAGAAATATCAAGTAAGATTGCTGAATGTGAAGATGCTTCAACATTTTTTGCAAGAAAATTGGTGGAAATTGGCATTCAAGTTGATAACATCTTAATTAAAAGATCTTACACACCAATTACAGATCTTGATGATGCAAATTGCCAGACTAATGAAGATACAATAGATAAGACAACCACCAATTCAAAAGTCAAGGGTATAAAAAAGAAGAATGGTGCATCTCGGGTAAAAGGTAGACCAAAAAGTTGTGTGGAGAAAAAAAGAAGAAGCAAAGGGACTACATCGAGACAAGTTTTTTCTCGCACCATGCCACTTCCAGCTATACAGGTACAACATGACAGTAACTTGTCTTTATTACTTTGTTTATGTTTATACAATTTTAGCCTTATATGTATTTAA 1089 0.3554 MEHEVTQDDIVPYVGMEFDTEDHAYRFYNMYAGFIGFSVRKDWRNKSKLDEEIVISRKFVCFKEGFKKVKGHERKMTRKDIRTGCLAHMVIGRQLSGKYIVTSFVKDHNHELATPKSRHKLPSQRRVSIAQAAEVEMANRSGIRKKLIFEFMSRQVGGRENVGCTAKDINNHLNSKRMKEMEEVIPPKYILKRWTKNARSGCVLDNKGQIIKEDPKLAVSNRFKDLCRTAVEISSKIAECEDASTFFARKLVEIGIQVDNILIKRSYTPITDLDDANCQTNEDTIDKTTTNSKVKGIKKKNGASRVKGRPKSCVEKKRRSKGTTSRQVFSRTMPLPAIQVQHDSNLSLLLCLCLYNFSLICI. 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04657 362 MobiDBLite consensus disorder prediction 299 326 - -
Seca2g04657 362 MobiDBLite consensus disorder prediction 299 316 - -
Seca2g04657 362 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 179 - -
Seca2g04657 362 Pfam FAR1 DNA-binding domain 26 113 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04657 Seca-Chr2 132684569 132686788 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g04657 FAR1 9.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04657 - K17604 tpra:123914859 313.538