Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04647 ATGAAGGGAAAGTTTCTAAGAGGATGTGTTAACAAGTGGAAGAAAATGGGGAGTGGAGTGATACCATGTTCTTCCTTGGATTACTGTTGTAGATGGGCTTTGTGGTCTTCCATGCATAAAAGGGACTTCATCCCAAATGATGTCCCAAAGGGTCATTTGGTTGTCTATGTAGGAGAGAATCACAAGAGATTTGTCATCAAGATTACTTTACTCAACCATCCACTCTTCAAGGCCTTGCTGGATCAAGCTCAGGATGAATATGATTTCACAGCAGATTCAAAACTCTGTATTCCTTGCAATGAGAATCTTTTCCTCAGTGTCCTTCATTGTGCCAGCTCTCCACATAAAGAAAGGGTGTTTGTGTGTGTCTGA 372 0.414 MKGKFLRGCVNKWKKMGSGVIPCSSLDYCCRWALWSSMHKRDFIPNDVPKGHLVVYVGENHKRFVIKITLLNHPLFKALLDQAQDEYDFTADSKLCIPCNENLFLSVLHCASSPHKERVFVCV. 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04647 123 Pfam Auxin responsive protein 40 109 IPR003676 GO:0009733
Seca2g04647 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04647 Seca-Chr2 132548181 132548552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04647 46 118 Calmodulin-binding Proteins AT4G34750 44.156 1.20e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04647 K14488 - vvi:100253355 199.519