Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04605 ATGGCCGATGAATTTGAGTTTGGCGATAAAGTTCCTCCTTCCTTCGATCGCGTGGATTCTGGATCCCAAGGTTTCAACCCAGGCTTAATAGTTCTCTTGGTTGTTGCTGGGTTGCTATTGACATTCCTCATTGGAAATTATGTGCTCTACACGTATGCACAGAAGACACTCCCTCCTAGAAAAAAGAAGCCAATCTCAAAAAAGAAGATGAGGAAGGAGAGACTGAGGCAAGGCGTCTCAGCACCTGGAGAATAG 255 0.4549 MADEFEFGDKVPPSFDRVDSGSQGFNPGLIVLLVVAGLLLTFLIGNYVLYTYAQKTLPPRKKKPISKKKMRKERLRQGVSAPGE. 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04605 84 MobiDBLite consensus disorder prediction 58 84 - -
Seca2g04605 84 Pfam DNA binding protein S1FA 21 84 IPR006779 GO:0003677|GO:0005634|GO:0006355
Seca2g04605 84 PANTHER DNA-BINDING PROTEIN S1FA2 1 84 IPR006779 GO:0003677|GO:0005634|GO:0006355
Seca2g04605 84 MobiDBLite consensus disorder prediction 60 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04605 Seca-Chr2 132083027 132084857 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Seca2g04605 S1FA 1.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04605 - - gmx:100499820 135.576