Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04588 ATGAGTGCAGCTCTCCTGTCTCGTTTTGATTTAATTTTCATACTGCTGGACAAACCTGATGAACTTCTGGACAAGCGAGTCTCGGAGCACATCATGTCACTTCATGCTGCGCATGGACAACATTCGCCGGCATTGAAAAAGCGACGTGGAGATCCACCTTCTGATTCAAGAGCTGCTGAATCACAGAATGCTGAAGGTGTAGATTTGAGTGTTAGATCTGGTTCTTTAATTTCAAGGTTGAGACTTGACCCACAGAGAGACCGGGATTTTGTTCCATTACCCGGTCAACTTCTTCGCAAATACATTACTTATGCAAGAAGTTTTGTCTCTCCTAGGATGTCCAAGCCAGCAGCAGAAATCTTGCAAAAGTTTTACCTAAAACTAAGAGACCATAATACTTCGGCTGATGGTACTCCTATAACAGCAAGGCAGCTGGAAAGTCTAGTAAGGCTAGCTGAAGCTCGAGCTCGGCTGGACTTGAGAGCAGAAATAACGGCCCAGGATGCAATGGATGTTGTCGAAATCATGAAGGAATCCCTGTATGATAAATATGTTGATGAGCATGGTGTCGTGGATTTTGGTCGAAGTGGGGGGATGAGTCAGCAGAAAGAGGCAAAACGCTTTCTAAATGCCCTTAACAAGCAATCGGAACTGGAACAGAAAGATTACTTTTCCATATCGGAAATATACAATCTGGCGGATAGGATTTCCTTGAAAGTCCCTGATATTGACACTTTCATCGATAATTTAAACAGCGTTGGTTATCTACTAAAAAAAGGACCAAAGACATACCAGGTGTTATCTTCTTCTTATACACGGAGCCAGTCGTTTCGGACAAGGGGCTAA 846 0.4338 MSAALLSRFDLIFILLDKPDELLDKRVSEHIMSLHAAHGQHSPALKKRRGDPPSDSRAAESQNAEGVDLSVRSGSLISRLRLDPQRDRDFVPLPGQLLRKYITYARSFVSPRMSKPAAEILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARLDLRAEITAQDAMDVVEIMKESLYDKYVDEHGVVDFGRSGGMSQQKEAKRFLNALNKQSELEQKDYFSISEIYNLADRISLKVPDIDTFIDNLNSVGYLLKKGPKTYQVLSSSYTRSQSFRTRG. 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04588 281 Pfam MCM AAA-lid domain 97 180 IPR041562 -
Seca2g04588 281 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 1 218 IPR031327 GO:0003677|GO:0005524|GO:0032508
Seca2g04588 281 Gene3D - 1 190 IPR027417 -
Seca2g04588 281 CDD MCM8_WHD 202 267 - -
Seca2g04588 281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 186 IPR027417 -
Seca2g04588 281 Pfam MCM P-loop domain 1 35 IPR001208 GO:0003677|GO:0005524|GO:0032508
Seca2g04588 281 MobiDBLite consensus disorder prediction 37 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04588 Seca-Chr2 131957972 131960915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04588 1 267 Core DNA Replication Machinery Family AT3G09660 76.779 4.26e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04588 K10737 - gmx:100784549 464.536