Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04586 ATGGTGTCATCTCAGCAAAGCTTCACACTAGAAATGGAGAGTAGCCTACTCTTCCTTTCCTCTCTCTCACTCTCACTCTTACTGCTACTCCCCTCGCGTTTTTCCTCTGCTCAGATCATGCAAGGTTTTGTGAGTTTGGACTGTGGAGGTACAGAAAAATTCACTGATGAAATTGGTCTTGAATGGACTCCTGATGATAAGCTTGCTTCTGGAGAAACAAGCACTATATCAGTTGCTAATGAGACACGGAAGCAATACACGACATTACGACATTTTCCTGCTGATTCCAGGAAATACTGCTATACACTTGATGTTGTAAGTAGGACAAGGTACCTGCTGAGGGCCACGTTCTTGTATGGGAACTTTGACAAAAACAATGTTTATCCTAAATTTGACATTTCTGTTGGGGCTACACACTGGTCTACTATTGTTATATCTGATGCTAATATTATAGAAATGCGAGAGCTTATATTCTTGGCTTCAAGTCCTACAGTAAGTGTATGCTTATCAAATGCAACAACTGGTCAGCCATTCATATCTACACTTGAACTTCGGCAATTCAATGGTTCAGTTTATTATACACAATTTGAGGAACAATTTTACCTCAGTGTCTCTGCAAGGATAAATTTTGGTGCAGATAGCGATACTCCAATCAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCTGATTCTGTGAAGAAAGCAAATTATCTTGTTGATGTTGCAGCTGGAACTGAGAAAATTTCTACCAATGTACCAATTGATGTTAACAGAGATGAAATGCCACCAGTGAAAGTGATGCAGACAGCCGTAGTGGGCACAAATGGATCTCTGACTTACCGGTTGAACTTGGATGGTTTTCCTGGTACTGGTTGGGCAGTCACCTATTTTGCAGAGATTGAAGATTTGGGTCCAAATGAGTCTAGAAAATTCAGGCTAGTGCTTCCAGGCCAGCCTGATCTTAGCAAGGCTGTTGTAAATATTGAAGAAAATGCTCAAGGGAAATATCGTCTTTATGAACCAGGATTTACCAATTTATCCCTACCCTTTGTGCTTTCCTTTAGATTTGGCAAGACATCTGATTCTTCCCAAGGACCCCTCCTAAATGCAATGGAGATAAATAAGTATCTGGAGAAAAATGATGGTTCTCCAGATGGAGCAGCTATTTCCAGTATACTTTCACACTACACTTCAGCAGACTGGGCAAAAGAAGGAGGCGACCCATGTCTTCCTGTTCCATGGTCATGGGTCCACTGTAGCTCAGATCCACAACCAAGAATAGTTTCAATCTTGTTATCCAGTAAAAACTTGACTGGGAATATTCCTTTGGAAATCACCAAATTGGTTGGTCTTGTTGAACTATGGCTTGATGGAAATATGCTGACCGGTCCACTACCAGATTTTACTGGATGCATGGACTTAAAGATCATCCATCTTGAAAACAATCAGTTGACGGGTGTGCTCCCAACCTCTTTGGTGAACCTTCCAAGTTTGAGGGAACTATATGTGCAAAATAATATGTTATCTGGAACAGTACCATCAGATCTTCTGAGCAAAGATTTGGTTTTGAACTACTCTGGAAATCTTAATCTTCATAGAGGAAGCAGAATAAACAGCCACATGTATGTTATTATTGGTTCAGCAGTTGGGGCTTCAGTTCTACTTTTGGCTACTGTTATATCTTGCTTGTTTATGCGTAAAGGCAAGAGAAGGTATTATGAGCGAGACCACATTGTTTCTGTCCCTACTCAAAGGCTGGTTTCTTGGAAGAGTGATGATCCTGCAGAAGCTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAATGCTACAAATAACTTTGAGAAAAAAATTGGCTCTGGTGGTTTCGGAGTTGTATACTATGGGAAACTGAAAGATGGAACTGAGATAGCAGTCAAAGTTCTAACCAGTAATTCCTATCAAGGCAAGCGAGAGTTCTCCAATGAGGTGACTCTTCTTTCAAGAATACATCACAGAAACTTGGTACAACTTCTTGGGTATTGCCGAGAAGAAGAGCATAGTATGCTTGTCTATGAGTTCATGCATAATGGCACTCTCAAGGAACATCTTTATGGCCCATTAGCGCATGGACGGAGTATCCATTGGATTAAGCGCCTTGAGATTGCTGAAGATGCTGCCAAAGGGATTGAATATCTTCATACAGGTTGTGTTCCAGTTGTTATCCATAGAGACTTAAAAAGCAGCAATATTCTTCTTGATAAGCACATGAGAGCCAAGGTTTCAGATTTTGGTCTTTCCAAACTTGCTGTTGATGGAGTCTCCCATGTTTCAAGCATTGTTCGGGGGACAGTAGGATATCTGGATCCTGAGTACTATATTTCCCAGCAGTTGACTGACAAGAGTGATGTTTATAGTTTTGGTGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCGAATGAAAGCTTTGGTGTGAATTGCCGCAACATAGTCCAGTGGGCAAAATTACACATTGAGAGTGGAGATATACAAGGCATTATTGATCCCTTGCTAAGGAATGACTATGACCTCCAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCACATGGACATATGCGGCCCTCAATTTCCGAAGTTCTAAAGGAGATACAAGATGCAATATCTATTGAGAGGGAGGCTGGAACATTAAGAGAAGGCAATTCAAATGAGATGTCAAGAAATTCTTTTCATTCTTCCATGAACATGGGTTCAATGGATCTGGGTGGAGCTGACAGTTACCTGTCAATTGATGAATCCATTTCACAGCCAACAGCAAGATAG 2826 0.4073 MVSSQQSFTLEMESSLLFLSSLSLSLLLLLPSRFSSAQIMQGFVSLDCGGTEKFTDEIGLEWTPDDKLASGETSTISVANETRKQYTTLRHFPADSRKYCYTLDVVSRTRYLLRATFLYGNFDKNNVYPKFDISVGATHWSTIVISDANIIEMRELIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYYTQFEEQFYLSVSARINFGADSDTPIRYPDDPFDRIWESDSVKKANYLVDVAAGTEKISTNVPIDVNRDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPGTGWAVTYFAEIEDLGPNESRKFRLVLPGQPDLSKAVVNIEENAQGKYRLYEPGFTNLSLPFVLSFRFGKTSDSSQGPLLNAMEINKYLEKNDGSPDGAAISSILSHYTSADWAKEGGDPCLPVPWSWVHCSSDPQPRIVSILLSSKNLTGNIPLEITKLVGLVELWLDGNMLTGPLPDFTGCMDLKIIHLENNQLTGVLPTSLVNLPSLRELYVQNNMLSGTVPSDLLSKDLVLNYSGNLNLHRGSRINSHMYVIIGSAVGASVLLLATVISCLFMRKGKRRYYERDHIVSVPTQRLVSWKSDDPAEAAHCFSFSEIENATNNFEKKIGSGGFGVVYYGKLKDGTEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEEHSMLVYEFMHNGTLKEHLYGPLAHGRSIHWIKRLEIAEDAAKGIEYLHTGCVPVVIHRDLKSSNILLDKHMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGVNCRNIVQWAKLHIESGDIQGIIDPLLRNDYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAISIEREAGTLREGNSNEMSRNSFHSSMNMGSMDLGGADSYLSIDESISQPTAR. 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04586 941 Gene3D - 203 378 - -
Seca2g04586 941 ProSiteProfiles Protein kinase domain profile. 613 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g04586 941 MobiDBLite consensus disorder prediction 894 916 - -
Seca2g04586 941 Pfam Malectin-like domain 46 376 IPR024788 -
Seca2g04586 941 FunFam Leucine-rich repeat receptor-like protein kinase 591 688 - -
Seca2g04586 941 Pfam Leucine rich repeat 470 510 IPR001611 GO:0005515
Seca2g04586 941 Pfam Protein tyrosine and serine/threonine kinase 615 815 IPR001245 GO:0004672|GO:0006468
Seca2g04586 941 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 689 897 - -
Seca2g04586 941 ProSitePatterns Serine/Threonine protein kinases active-site signature. 735 747 IPR008271 GO:0004672|GO:0006468
Seca2g04586 941 PANTHER OS07G0107800 PROTEIN-RELATED 476 889 - -
Seca2g04586 941 Gene3D Transferase(Phosphotransferase) domain 1 689 908 - -
Seca2g04586 941 SUPERFAMILY Protein kinase-like (PK-like) 599 883 IPR011009 -
Seca2g04586 941 FunFam Leucine-rich repeat protein kinase family protein 388 540 - -
Seca2g04586 941 Gene3D Phosphorylase Kinase; domain 1 589 688 - -
Seca2g04586 941 Gene3D Ribonuclease Inhibitor 390 540 IPR032675 -
Seca2g04586 941 SMART serkin_6 613 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g04586 941 CDD STKc_IRAK 619 886 - -
Seca2g04586 941 ProSitePatterns Protein kinases ATP-binding region signature. 619 641 IPR017441 GO:0005524
Seca2g04586 941 SUPERFAMILY L domain-like 414 529 - -
Seca2g04586 941 MobiDBLite consensus disorder prediction 900 916 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04586 Seca-Chr2 131936559 131944278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04586 35 723 Receptor kinase-like Gene Family AT2G37050 68.534 0.0 998
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca2g04586 Malectin_like 4.5e-78 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04586 - - gmx:100784017 1707.96